Protein Alignment Nup50 and RanBP3

DIOPT Version :9

• Sequence 1: NP_610355.1
• Gene: Nup50 / 35784
• FlyBaseID: FBgn0033264
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_651178.1
• Gene: RanBP3 / 42804
• FlyBaseID: FBgn0039110
• Length: 449
• Species: Drosophila melanogaster
• Alignment Length: 474
• Identity: 100/474 - (21%)
• Similarity: 162/474 - (34%)
• Gaps: 163/474 - (34%)

  Fly    48 IAGGSSAAEEDGAEE-----KTAEPKSVFSGFSGFGKPAASPAA--------GSPFSFLAN---- 95
            :|.||:|||..|.:|     :..:|.:.... :|..:.:...||        .|.|.|..|
  Fly    75 VATGSAAAESTGDKEDDDVDERPDPLTKLRS-NGIERSSMFAAAKNNMPNVQSSGFVFGQNVHER 138

  Fly    96 VTAP-ATTSSSEPKKSAFSFGFSSSSSSADRPVSTSICGTASTSSTAP----SPLPAKESTSTVD 155
            |.|| |...::||....     ::||.||....|:|   ||:|||:||    |.:.....|:...
  Fly   139 VVAPNAEQVTAEPDADT-----AASSVSAQEAASSS---TAATSSSAPLLFSSVIQNAAQTTETS 195

  Fly   156 GAKPTTSIFGNISAAKKESSEAKTSSSSTSLTSTMETSEYRES---------------------V 199
            .|..::||..: |:..|||:|||      |||..  ..||.||                     :
  Fly   196 EAAASSSICSS-SSNNKESAEAK------SLTDV--AREYEESRAQKRKYEEVETFTGEEDEINI 251

  Fly   200 ADLNRSVIKFLQDQMGKSPYCILTPVFKNYDEH---------LKDLQDEESA--RTN-------S 246
            .|::..:..||.               .|::|.         .|||:.:...  ||:       :
  Fly   252 IDVSCKLFAFLN---------------SNWEERGRGSLRLNDAKDLRGDSRVVFRTSGNLRLLLN 301

  Fly   247 TK---SKTAQARSQEPVAKVSRASSPPKAATTFTFGKPSAPIGASVSPLAKKPNCTITSGGTTTT 308
            ||   :..|:..||:.: :::...:..........|:|     |.::.|.|         ..:..
  Fly   302 TKVWAAMVAERASQKSL-RLTAIDNSGVVKIFLAMGRP-----ADIAQLHK---------ALSER 351

  Fly   309 TATPLVSFGSTASFTAPVPSSSSIFSLTAKPTGEAKSDDTPKSSIFSFGAKDTTTKKDEPNFSAP 373
            .|...||.          |...|:.........||.:...|:|          ||..||...:||
  Fly   352 IAKRKVSH----------PEECSVEEAKNGVASEAAASLQPES----------TTHDDEDEDAAP 396

  Fly   374 KTNGFSFGLKSNNDDKPSTSLFAGFGKAPGGAGDGAKGFSFTNSATPFSLGNIHPPAAAAAPAEE 438
            ..:|   .:.:..|         .:|.:|...                   .:.|.::|..|...
  Fly   397 GPSG---AISAEAD---------SYGPSPKKV-------------------IVQPDSSADVPVPP 430

  Fly   439 EKEEDTPPKVEFKQVVEDD 457
            .:|.|...:.|.|:..:.:
  Fly   431 VEEGDEDAEAEAKESTDQN 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nup50	NP_610355.1	NUP50	4..80	CDD:312461	10/36 (28%)
		RanBD_NUP50	453..563	CDD:269991	0/5 (0%)
RanBP3	NP_651178.1	RanBD_RanBP3	243..352	CDD:270001	20/138 (14%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23138
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100