Sequence 1: | NP_610355.1 | Gene: | Nup50 / 35784 | FlyBaseID: | FBgn0033264 | Length: | 564 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_587937.2 | Gene: | nup61 / 2539348 | PomBaseID: | SPCC18B5.07c | Length: | 549 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 555 | Identity: | 133/555 - (23%) |
---|---|---|---|
Similarity: | 207/555 - (37%) | Gaps: | 144/555 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 121 SSADR--PVSTSICGTASTSST--APSPLPAKESTSTVDGAKPTTSIFGNISAAKKESSEAKTSS 181
Fly 182 ---SSTSLTSTMETSEYRESVADLNRSVIKFLQDQMGKSPYCILTPVFKNYDEHLKDLQD---EE 240
Fly 241 SARTNSTKSKT--AQARSQEPVAKVSR--ASSP---------PKAATTFTFGKPSAPIGASVSPL 292
Fly 293 AKKPNCTITSGGTTTTTATPLVSFG-----------------STASFTAPVPSSSSIFSLTAKPT 340
Fly 341 GEAKSDD---TPKSSIFSFG-----------------AKDTTTKKDEP-------NFSAP-KTNG 377
Fly 378 FSFGLKSNNDDKP-----------------STSLFAGFGKAPGGAGDGAKGFSFTNSATPFSLG- 424
Fly 425 ------NIHPPAAAAAPAEEEKEEDTPPKVEFKQVVED-------------------DAIYSKRC 464
Fly 465 KV--FIKKDKDFGDRGVGTLYLKPVKDSEKIQLLVRADTNLGNILVNLILSKGIPCQRMGKNNVL 527
Fly 528 MVCVPTPEDSKATSL-LLRVKTGDEADDLLEKIKE 561 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup50 | NP_610355.1 | NUP50 | 4..80 | CDD:312461 | |
RanBD_NUP50 | 453..563 | CDD:269991 | 31/131 (24%) | ||
nup61 | NP_587937.2 | NUP50 | 3..63 | CDD:286055 | 14/49 (29%) |
RanBD_NUP50 | 431..543 | CDD:269991 | 30/114 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR23138 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |