DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asap and GLO3

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_011048.1 Gene:GLO3 / 856859 SGDID:S000000924 Length:493 Species:Saccharomyces cerevisiae


Alignment Length:639 Identity:122/639 - (19%)
Similarity:199/639 - (31%) Gaps:262/639 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 AEDEGDQKAWMAVLVNCKEKALTKAFQHANPQMSPSLVELQKTVIRYVQLLPGNDRCCDCGSRND 450
            :.|||:..|        .|:...:.||.....|.                   |..|.|||::|.
Yeast     2 SNDEGETFA--------TEQTTQQVFQKLGSNME-------------------NRVCFDCGNKNP 39

  Fly   451 VTWISLNFGILVCIQCSGVHRDLGVHHSRIQSLTLDNLTTANLLIARAMGNSTLNDIMEAKLGRG 515
             ||.|:.||:::|||||.|||::|||.:.::|.|||..|..||...:..||....|......|: 
Yeast    40 -TWTSVPFGVMLCIQCSAVHRNMGVHITFVKSSTLDKWTINNLRRFKLGGNHKARDFFLKNNGK- 102

  Fly   516 KLQHESSMEERYDFIRAKY---VAKRYVMRTCSDDNDLRCDLEQAVVNADMSQLLQVWAEGADLT 577
            :|.:.::::     .:.||   |||:|.:..   |..::.|:|                      
Yeast   103 QLLNTANVD-----AKTKYTSPVAKKYKIHL---DKKVQKDME---------------------- 137

  Fly   578 CCLPSSDAGETALHLAVLREMGSTLHIVDFLIQNMPPKGLNKATNPAGLLDVTGKNTALHLCALH 642
             ..||.                                                           
Yeast   138 -LYPSE----------------------------------------------------------- 142

  Fly   643 DRRECMKLLLRSGADYELKNSQNKTALDIAKEMGHNSCRELIECAIKREKSAFDHINTDWNLPNE 707
                    |:.:|.|      .:.:.||...:...::.:|          ::.|...::|..|:.
Yeast   143 --------LVLNGQD------SSDSPLDTDSDASRSTSKE----------NSVDDFFSNWQKPSS 183

  Fly   708 DGS---------------TDFSDDETVIDERKSRSRPPSFAGGDSPVLRSRSSTCDSIQSSSSPI 757
            :.|               |..|..:|.:.:.:|....   |....|||.|:.....||.|||.. 
Yeast   184 NSSSKLNVNTGSLAPKNNTTGSTPKTTVTKTRSSILT---ASRKKPVLNSQDKKKHSILSSSRK- 244

  Fly   758 ANCPSR----------------------------QFTLPSGLPSYTHSAGTSPKQHISVGQYLGS 794
               |:|                            :||        ..|:.|..:|:....|::  
Yeast   245 ---PTRLTAKKVDKSQAEDLFDQFKKEAQQEKEDEFT--------NSSSSTKIRQNDYDSQFM-- 296

  Fly   795 ATNVGGNGPGNGGSSPSSASSQS------VRAARNSLNM----QSD--------LGGHVTGARKS 841
                 .|..||..:|....::|.      :....||.:.    |.|        ||..:| ...:
Yeast   297 -----NNSKGNNNNSIDDINTQPDEFNDFLNDTSNSFDTTRKEQQDTLTPKFAKLGFGMT-MNDA 355

  Fly   842 TSTANMNSLKKRTAPAP--------PPGTLGSASSSSFYGTLPHPPRHSQNFDASDIRAINHKNQ 898
            ...|......::.|..|        ..||..:.||...:|        ..:||.:..|..:.|.:
Yeast   356 NDLAKQQKESQKIAQGPRYTGRIAERYGTQKAISSDQLFG--------RGSFDEAANREAHDKLK 412

  Fly   899 SLDVAYGTLPHLRSVESSPRGG-----GGYGYGVSQDPGGSGN----GSNNSLM 943
            :.|.|       .|:.||...|     ..:|..::....|:||    .|||..:
Yeast   413 TFDNA-------TSISSSSYFGEDKEVDEFGNPINSSGSGAGNFDGRNSNNGFI 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288
PH_ASAP 302..410 CDD:270071 5/23 (22%)
ArfGap_ASAP 425..541 CDD:350063 40/118 (34%)
Ank_2 554..662 CDD:403870 6/107 (6%)
ANK repeat 586..622 CDD:293786 0/35 (0%)
ANK repeat 624..662 CDD:293786 3/37 (8%)
Ank_2 636..>693 CDD:403870 6/56 (11%)
SH3_ASAP 1095..1149 CDD:212755
GLO3NP_011048.1 COG5347 9..363 CDD:227651 95/519 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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