DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asap and AGD4

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001320312.1 Gene:AGD4 / 837629 AraportID:AT1G10870 Length:780 Species:Arabidopsis thaliana


Alignment Length:821 Identity:186/821 - (22%)
Similarity:317/821 - (38%) Gaps:213/821 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 FASRMPDCRHTIGVLEERLEFDREGLTKLKKAVKAIHNSGNTHVDNEMFMVRALERLGGKVIEQD 91
            |..::.....|...|::|.:       ||.|.||....:.......|......||..||   ..|
plant    13 FQKQVCSLEGTADELKDRCQ-------KLYKGVKKFMGTLGEASKGESAFAACLEEFGG---GPD 67

  Fly    92 EP---DIGAAFL-KFSVVTKELSALMKTLMQNINNIVMFPVDSMLKSELRGVKGDMKRPFDKAAK 152
            :|   .||...: ||....:||::..:.|...:.::::..:.:.:..:|:..| :.:..|||||.
plant    68 DPISLSIGGPVISKFINALRELASYKEFLCSQVEHVLLERLMNFISVDLQEAK-ESRHRFDKAAH 131

  Fly   153 DYE---AKFIKIEKEKKAQAKEAGMVRTEIDAAVVAEEMEKERRLYQLQTCEYLLKYKDIKTKTG 214
            .|:   .||:.::|.          .|.|| .|.:.|::|..:..::......:.....|:.|..
plant   132 SYDQSREKFVSLKKN----------TRGEI-VAELEEDLENSKSTFEKSRFNLVNSLMTIEAKKK 185

  Fly   215 IELLQHLIEYYHALSNYFKDGLQTIEHFGTYIGDL----SEKLHEIKQKQDEDRRSLLDLRTVLR 275
            .|.|:.:.....|...|||.|...:.....:|..:    .:...:.|.:||...|.:.:.||  :
plant   186 YEFLESISAIMDAHLRYFKLGYDLLNQLEPFIHQILTYAQQSKEQSKIEQDRLARRIQEFRT--Q 248

  Fly   276 STPDFER-VDNVPSSESRSGGAGYSL------HQLQGDKHHGVTRQGHLLKKSEGKVRRVWQKRR 333
            |..|.:: |.|..||.:.....|.::      ..|..||.  |.:||:|||:| ..:|..|:::.
plant   249 SELDSQQLVANAESSGANGNRVGGNIPYKNTETSLTADKE--VIKQGYLLKRS-SSLRTDWKRKF 310

  Fly   334 CRVTSDGFLDIFHADESKPP-------------------------------------TRVNLLTC 361
            ..:.|.|.:..:..:.:|..                                     ..::|.|.
plant   311 FVLDSHGSMYYYRTNGNKSMGSHHHYSGSSDHNTGVFGRFRARHNRSGSLTEGSLGYNTIDLRTS 375

  Fly   362 QIKPVPDD---KRGFDLISYNRPYHFQAEDEGDQKAWMAVLVNCKEKALTKAFQHANP------- 416
            .||...:|   :..|.:||..:.|..|||:..|:..|:..:.......|...|...:|       
plant   376 LIKLDAEDMDLRLCFRIISPQKTYTLQAENGADRMDWVNKITKAIGTLLNSHFLQQSPVRYLDKD 440

  Fly   417 --QMSPSLVELQKTVIRY--------------VQLLPGNDRCCDCGSRNDVTWISLNFGILVCIQ 465
              ..:|:...:....||:              ::.||||:.|.:|.: .:..|.|||.|:|:|||
plant   441 NSSSAPANAVVSGDQIRHNDSRQNIGDDVSTILRGLPGNNACAECNA-PEPDWASLNLGVLLCIQ 504

  Fly   466 CSGVHRDLGVHHSRIQSLTLD-NLTTANLL-IARAMGNSTLNDIMEAKL------------GRGK 516
            ||||||:||||.|:::||:|| .:....:| :.|.:||...|.:.|..|            ....
plant   505 CSGVHRNLGVHISKVRSLSLDVKVWEPTILDLFRNLGNVYCNSLWEGLLHLDDDCVAFCSEDGSA 569

  Fly   517 LQHES----------SMEERYDFIRAKYVAKRYVMRTCSDDN-DLRCDLEQAVVNADMSQLLQV- 569
            |.|.|          |::|:|  |..||:.|..|::..|:.| .....:.:||.:.::.::.:: 
plant   570 LSHASVSKPCPEDSFSVKEKY--ILGKYLEKALVIKDESEANLSAASRIWEAVQSRNIREIYRLI 632

  Fly   570 --------------------------WAEGA-----DLTCCLPSSDAGE--------TALHLA-- 593
                                      .||.|     |.|.|....::.|        :.||:|  
plant   633 VTTGDVNIINTKFDDITDIDAYHHIDAAEKAVKKRHDPTVCQRIKESNEPRSCLQGCSLLHVACH 697

  Fly   594 --------VLREMGSTLHIVDFLIQNMPPKGLNKATNPAGLLDVTGKNTALHLCALHDRRECMKL 650
                    :|.:.|:.|:|.|:                      .|: |.||.|......:..|:
plant   698 IGDSVLLELLLQFGADLNIRDY----------------------HGR-TPLHHCISSGNHKFAKI 739

  Fly   651 LLRSGADYELKNSQNKTALDIAKEMGHNSCRELI----ECA 687
            |||.||...:::....:.|:.|.|||..:..||.    |||
plant   740 LLRRGARPSIEDDGGLSVLERAMEMGAITDEELFLLLAECA 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288 49/220 (22%)
PH_ASAP 302..410 CDD:270071 30/147 (20%)
ArfGap_ASAP 425..541 CDD:350063 49/153 (32%)
Ank_2 554..662 CDD:403870 28/157 (18%)
ANK repeat 586..622 CDD:293786 9/53 (17%)
ANK repeat 624..662 CDD:293786 11/37 (30%)
Ank_2 636..>693 CDD:403870 19/56 (34%)
SH3_ASAP 1095..1149 CDD:212755
AGD4NP_001320312.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D751525at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.