DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asap and git2a

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_005165241.1 Gene:git2a / 793882 ZFINID:ZDB-GENE-060526-267 Length:804 Species:Danio rerio


Alignment Length:750 Identity:165/750 - (22%)
Similarity:261/750 - (34%) Gaps:243/750 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   420 PSLVELQKTVIRYVQLLPGNDRCCDCGSRNDVTWISLNFGILVCIQCSGVHRDLGVHHSRIQSLT 484
            |:|.|     .|..:.|..::.|.|| |.:|..|.|:|.|:|:|.:|..|||.||.|:|:::.|:
Zfish     4 PTLTE-----TRMSKRLRNSEVCADC-STSDPRWASVNRGVLICDECCSVHRSLGRHNSQVRHLS 62

  Fly   485 LDNLTTANLLIARAMGNSTLNDIMEAKL--------GRGKLQHESSME-ERYDFIRAKYVAKRYV 540
            ..:.....|.:.:.:.|:..|.|.|..|        .:.|..|:..:. .:.|||:|||....||
Zfish    63 NTSWPPTQLQMVQTLYNNGANAIWEHTLLDPSSIMSSKRKPNHQDKLHPNKADFIKAKYQMLAYV 127

  Fly   541 MR-TCSDDNDLRCDLEQAVVNADMSQLLQVWAEGADLTCCLPSSDAGETALHLAVLREMGSTLHI 604
            .| .|.||:        :...||:|:.|.......:|          ||.|.|..|....:..| 
Zfish   128 HRLPCRDDD--------STAAADLSKQLHSSVRTGNL----------ETCLRLLSLGAQANYFH- 173

  Fly   605 VDFLIQNMPPKGLNKATNPAGLLDVTGKNTALHLCALHDRRECMKLLLRSGADYELKNSQNKTAL 669
                    |.||                ||.||:.|...:....:||...|||....:|..||.:
Zfish   174 --------PEKG----------------NTPLHIAAKAGQVCQAELLCVYGADPGAPDSSGKTPI 214

  Fly   670 DIAKEMGHNSCRE-LIE-------------CAIKREKSAFDHI----NTDWNLPNEDGSTDF--- 713
            :.|::.||....: |:|             |..|.:..:..|.    ..|.|:..|  .|:|   
Zfish   215 NYARQAGHQDLADRLVEIQYELTDRLAFYLCGRKPDHKSGQHFIIPQMADRNVSVE--LTEFAKA 277

  Fly   714 --------SD---DETVIDERKSRSRPPSFAGGDSPVLRSRSSTCDSIQSSSSPIANCPSRQFTL 767
                    ||   :|..:|......|            |...:...:.|:.|:.:.......| |
Zfish   278 AKRKLQSLSDHLFEELAMDVYDEVDR------------RETDAVWLATQNHSTLVTETTVVPF-L 329

  Fly   768 PSGLPSYT---------------HSAGT-------------------SPKQHISVGQYLGSATNV 798
            |.. |.|:               |...|                   |||.::.|  :..|    
Zfish   330 PVN-PEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQHGNPVPSPKDNVDV--FFKS---- 387

  Fly   799 GGNGPGNGGSSPSSASSQSVRAARNSLNMQSDLGGHVTGAR--KSTSTANMNSLKKRTAPAPPPG 861
                   |||...|.|.:..:...:|:....|..   |..|  |:..|.:::|            
Zfish   388 -------GGSRHGSESQEIDQPDYDSVASDEDTD---TDLRMGKADRTKSLDS------------ 430

  Fly   862 TLGSASSSSFYGTLPHPPRHSQNF-------DASD------IRAINHKNQSLDVAYGTLPHLRSV 913
                        .|...|...|.|       .||:      ::|.::.|:.|.:....|..|:|.
Zfish   431 ------------DLSDGPVSVQEFLEVKNALSASEAKIQELMKANSNLNEELRLMQKKLQSLQSE 483

  Fly   914 ESSPRGGGGYGYGVS-----QDPGGSGNGSNNSLMPAMTTFGHKRSPSGESLNRNIHL------- 966
            .||.|      ..||     |.|||..:.:     |:..:.....|.|..:|.|::..       
Zfish   484 NSSLR------RQVSAQQPYQAPGGPDHPN-----PSSPSSCSSSSSSSSALKRHLSARASRPMS 537

  Fly   967 -----AGAKLVLPPTGELPTLKHVDKSALTRPKIPP-PGPPS----EREISNGQSNESI--SSMD 1019
                 :|.|..| |.||.|..:.      |.|.:.| |...|    :..:|:|..:.::  |.:|
Zfish   538 MYETGSGLKPFL-PKGETPYPEE------TFPTLQPFPAYASKFDKQSSVSDGDYDNTVNESDLD 595

  Fly  1020 EGPVAPPRKL-----VNQSANFPDYESWHTDMDSS 1049
            :.......:|     :.:|.:.|:.|....::|.|
Zfish   596 DSGFGRRCRLRSSGWMGESGSIPELEDHECELDPS 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288
PH_ASAP 302..410 CDD:270071
ArfGap_ASAP 425..541 CDD:350063 37/124 (30%)
Ank_2 554..662 CDD:403870 24/107 (22%)
ANK repeat 586..622 CDD:293786 9/35 (26%)
ANK repeat 624..662 CDD:293786 10/37 (27%)
Ank_2 636..>693 CDD:403870 18/70 (26%)
SH3_ASAP 1095..1149 CDD:212755
git2aXP_005165241.1 ArfGap 12..134 CDD:214518 39/122 (32%)
Ank_2 147..239 CDD:289560 29/126 (23%)
ANK <147..230 CDD:238125 27/117 (23%)
ANK repeat 147..175 CDD:293786 8/46 (17%)
ANK repeat 177..207 CDD:293786 11/45 (24%)
GIT_SHD 278..306 CDD:285690 6/39 (15%)
GIT_SHD 342..369 CDD:285690 2/26 (8%)
GIT_CC 426..490 CDD:293167 16/93 (17%)
GIT1_C 632..798 CDD:289013
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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