DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asap and Arap1

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_006508249.1 Gene:Arap1 / 69710 MGIID:1916960 Length:1452 Species:Mus musculus


Alignment Length:403 Identity:91/403 - (22%)
Similarity:152/403 - (37%) Gaps:126/403 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 LKKSEGKVRRVWQKRRCRVTSDGFLDIFHADE---SKPPTRVNLLTCQIKPVPDDKRGFDLISYN 379
            |.|:..:...::|||..|:.:| :|..|.:::   ||....|..: |::.|:.|.|  |::|:.|
Mouse   336 LDKNPPQGSYIYQKRWVRLDAD-YLRYFDSNKDAYSKRFVPVACI-CRVAPIGDQK--FEVITNN 396

  Fly   380 RPYHFQAEDEGDQKAWMAVLVNCKEKALTKA-FQH-----------------ANPQMSPSL---- 422
            |.:.|:||.:.::..||        :||.:| .:|                 ..|..:.||    
Mouse   397 RTFAFRAESDVERNEWM--------QALQQAVVEHRARFRLSSASVLGVRGSEQPDRAGSLELRG 453

  Fly   423 -------------VELQKTV--------IRYVQLLPGN----DR--------------------- 441
                         |:|.|.:        |.::.:..||    ||                     
Mouse   454 FKNKLYVAVTGDKVQLYKNLEEFHLGIGITFIDMNVGNVKEVDRRSFDLTTPYRIFSFSADSELE 518

  Fly   442 ---------------------------------CCDCGSRNDVTWISLNFGILVCIQCSGVHRDL 473
                                             |.|||:... .|.|:|..:::|.:|:|.||.|
Mouse   519 KEQWLEAMQGAIAEALSTSEVAERIWAAAPNRFCADCGAAQP-DWASINLCVVICKRCAGEHRGL 582

  Fly   474 GVHHSRIQSLTLDN--LTTANLLIARAMGNSTLNDIMEAKLGRGK-LQHESSMEERYDFIRAKYV 535
            |...|:::||.:|.  .|.|.:.:...:||...|....|.:...: |:..||...|...:.|||.
Mouse   583 GAGVSKVRSLKMDRKVWTEALIQLFLHLGNGPGNHFWAANVPPSEALEPSSSPGARRYHLEAKYR 647

  Fly   536 AKRY--VMRTCSDDNDLRCDLEQAVVNADMSQLLQVWAEGADLTCCLPSSDAGETALHLAVLREM 598
            ..:|  ......:..:|...|..||...|:::...:...||.:: |.....|..|.|.||  .:.
Mouse   648 EGKYRRYHPLFGNQEELDKALCAAVTTTDLAETQALLGCGAGVS-CFSGDPAAPTPLALA--EQA 709

  Fly   599 GSTLHIVDFLIQN 611
            |.||. ::||..|
Mouse   710 GQTLQ-MEFLRNN 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288
PH_ASAP 302..410 CDD:270071 27/94 (29%)
ArfGap_ASAP 425..541 CDD:350063 39/186 (21%)
Ank_2 554..662 CDD:403870 18/58 (31%)
ANK repeat 586..622 CDD:293786 10/26 (38%)
ANK repeat 624..662 CDD:293786
Ank_2 636..>693 CDD:403870
SH3_ASAP 1095..1149 CDD:212755
Arap1XP_006508249.1 SAM_Arap1,2,3 6..68 CDD:188889
PH1_ARAP 331..422 CDD:270073 28/97 (29%)
PH2_ARAP 438..527 CDD:270074 11/88 (13%)
ArfGap_ARAP 537..652 CDD:350066 31/115 (27%)
PH3_ARAP 745..851 CDD:270076
PH-like 864..954 CDD:388408
RhoGAP_ARAP 959..1137 CDD:239850
RA_ARAP1 1173..1265 CDD:340746
PH5_ARAP 1265..1404 CDD:270079
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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