DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asap and Smap1

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_003750716.3 Gene:Smap1 / 684800 RGDID:1585595 Length:467 Species:Rattus norvegicus


Alignment Length:627 Identity:128/627 - (20%)
Similarity:204/627 - (32%) Gaps:229/627 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 NCKEKALTKAFQHANPQMSPSLVELQKTVIRYVQLLPGNDRCCDCGSRNDVTWISLNFGILVCIQ 465
            :|:|||     |..|.|....|.:|.:.        ..|..|.||.::.. .|.|.|.|:.:||:
  Rat     5 SCREKA-----QKLNEQHQLILSKLLRE--------EDNKYCADCEAKGP-RWASWNIGVFICIR 55

  Fly   466 CSGVHRDLGVHHSRIQSLTLDNLTTANLLIARAMGNSTLNDIMEAKLGRGKLQHESSMEERYDFI 530
            |:|:||:||||.||::|:.||..|...:...:.|||:....:.||.|.....:.::.....: ||
  Rat    56 CAGIHRNLGVHISRVKSVNLDQWTPEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEF-FI 119

  Fly   531 RAKYVAKRYVMRTCSDDNDLRCDLEQAVVNADMSQLLQVWAEGADLTCCLPSSDAGETALHLAVL 595
            |.||..|:|.     |.|.:      |:.|                   :.||||          
  Rat   120 RDKYEKKKYY-----DKNAI------AITN-------------------ISSSDA---------- 144

  Fly   596 REMGSTLHIVDFLIQNMPPKGLNKATNPAGLLDVTGKNTALHLCALHDRRECMKLLLRSGADYEL 660
                             |.:.|  .::|:             |.|..|:.:..|       :.|.
  Rat   145 -----------------PLQPL--VSSPS-------------LPAAVDKNKIEK-------EKEK 170

  Fly   661 KNSQNKTALDIAKEMGHNSCRELIECAIKREKSAFDHINTDWNLPNEDGSTDFSDDETVIDERKS 725
            |..:.|              ||      |..:.....:.|:.....||..          .|.|.
  Rat   171 KKEEKK--------------RE------KEPEKPAKALTTEKLQKKEDQQ----------PEPKK 205

  Fly   726 RSRPPSFA-----------GGDSPVLRSRSSTCDSIQ----------SSSSPIANCPSRQFT--L 767
            .:.|.:.|           ..::||....::....:.          |:..|.|..|..|.|  :
  Rat   206 STSPKNVAEPTVDLLGLDGPAEAPVTNGNTTAAPPLSDDLDIFGPMISNPLPAAVMPQAQGTASI 270

  Fly   768 PSGLPSYTHSAGTSPKQHISVGQYLGSATNVGGNGPGNGGSSPSSASSQSVRAARNSLNMQSDLG 832
            |:.....|.::|.           |...|               ..:::|...|:..|:..|.|.
  Rat   271 PAAAALSTITSGD-----------LDLFT---------------EQTTKSEEGAKKQLSKDSILS 309

  Fly   833 GHVTGARKSTSTANMN------SLKKRTA---------PAP-PPGTLGSASSSSFYGTLPHPPRH 881
            .:.|||::||....|.      :.:..||         |.| .||.:|:....: .|.:...|.|
  Rat   310 LYGTGAQQSTPGVFMGPTNIPFTSQAPTAFQGFPSMGVPVPAAPGLMGNMMGQN-TGMMVGMPMH 373

  Fly   882 SQNFDASDIRAINHKNQSLDVAYGTLPHLRSVESSPRGG---------GGYGYGVSQDPG----- 932
            :....              :...|.:|..::| ..|:||         ..:|...:|.|.     
  Rat   374 NGFMG--------------NAQTGVMPLPQNV-VGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQ 423

  Fly   933 ----------GSGNGSNNSLMPAMTTFGHKRSPSGESLNRNI 964
                      .|.|.|.....|..||.|...|.||::|:..:
  Rat   424 MNQQMAAMNLSSANSSAGFGQPPSTTAGWSGSSSGQTLSTQL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288
PH_ASAP 302..410 CDD:270071 4/8 (50%)
ArfGap_ASAP 425..541 CDD:350063 38/115 (33%)
Ank_2 554..662 CDD:403870 14/107 (13%)
ANK repeat 586..622 CDD:293786 2/35 (6%)
ANK repeat 624..662 CDD:293786 5/37 (14%)
Ank_2 636..>693 CDD:403870 10/56 (18%)
SH3_ASAP 1095..1149 CDD:212755
Smap1XP_003750716.3 ArfGap 20..120 CDD:279720 33/109 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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