DRSC/TRiP Functional Genomics Resources

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Protein Alignment Asap and arfgap2

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_005159305.1 Gene:arfgap2 / 641490 ZFINID:ZDB-GENE-051120-177 Length:551 Species:Danio rerio


Alignment Length:633 Identity:126/633 - (19%)
Similarity:232/633 - (36%) Gaps:161/633 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   420 PSLVELQKTVIRYVQLLPGNDRCCDCGSRNDVTWISLNFGILVCIQCSGVHRDLGVHHSRIQSLT 484
            |:..|:. |:.:.::.:|.|..|.||.::|. :|.|:::|:.:||.|||:||.||||.|.|:|..
Zfish     5 PNKTEIH-TIFKRLRSIPTNKACFDCAAKNP-SWASISYGVFLCIDCSGIHRSLGVHLSFIRSTE 67

  Fly   485 LD-NLTTANLLIARAMGNSTLNDIMEAKLGRGKLQHESSMEERYDFIRAKYVAKRYVMRTCSDDN 548
            || |.....|...:..||:.......        ||..:..:    ..|||.::...|       
Zfish    68 LDSNWNWFQLRCMQVGGNANAMGFFR--------QHGCTTND----TNAKYNSRAAQM------- 113

  Fly   549 DLRCDLEQAVVNADMSQL-LQVWAEGADLTCCLPS------SDAGETALHLAVLREMGS------ 600
             .|..:.| :.||.:|:. ..:|.:.:  :|..||      :|..:.....|:..:|.|      
Zfish   114 -YREKIRQ-LANAALSKYGTDLWIDSS--SCAQPSPVEKRETDFFDEHTQPAISWDMASPSLTDQ 174

  Fly   601 --TLHIVDFLIQNMPPKGLNKATNPAGLLDVTGKNTALHLCALHDRRECMKLL------------ 651
              ..::...|.|:.|.......|.|.....:.|.:|:.....    .:.|:|.            
Zfish   175 NGAENVNPQLAQSNPKNSETPNTQPEEGPSIEGLSTSPKATI----EDSMRLTSEEPQSPKDVKP 235

  Fly   652 ----------------LRSGADYELKNSQNKTALD----IAKEMGHNSCRELIECAIKREKSAFD 696
                            .:.|...:..:|::.:.::    :|::|     ||  |.|.:.:|.|.:
Zfish   236 SIIGKKKPVAAKKGLGAKKGLGAQKVSSKSFSEVEKQAQVAEKM-----RE--EQAAEAKKQADE 293

  Fly   697 HINTDWNLPNEDGSTDFSDDETVID--ERKSRSRPPSFAGGDSPVLRSRSSTCDSIQS------S 753
            .|.....|..::...|...:|..:.  |.|.:.:......|    ..:||:...|:.:      .
Zfish   294 SIVASMRLAYKELEIDRKMEEKKMQNLEGKKKEQAERLGMG----FGNRSAVSHSVMAEMQVIEQ 354

  Fly   754 SSPIANCPSRQFTL--------PSGLPSYTHSAGTSPKQHISVGQYLGSATNVGGNGPGNGGSSP 810
            .:|:....|.:..|        .||.|.|..:..||       |...||..:      .:||||.
Zfish   355 ETPVGVKSSSRSKLDMFEEPGFASGPPKYKDNPFTS-------GDSFGSRWD------NDGGSSF 406

  Fly   811 SSASSQSVRAARNSLNMQS--DLGGHVTGARK---STSTANMNSLKKRTAPAPPPGTLGSASSSS 870
            ||.:.:......:.:.:.|  .:|..:...||   |...:..:..:::.|.|.      :.||..
Zfish   407 SSWALEKEEPKDSEVTISSIQPIGERLPSRRKPEVSVPVSESSEARQKFANAK------AISSDM 465

  Fly   871 FYGTLPHPPRHSQNFDASDIRAINHKNQSLDVAYGTLPHLRSVESSPRGGGGYGYGVSQDPGGSG 935
            |:|...:|...::.              .|:...|:    .|:.|:...|.|     |..|  ||
Zfish   466 FFGRESNPEYEAKT--------------RLEGMSGS----TSISSADLFGDG-----SVRP--SG 505

  Fly   936 NGSNNSLMPAMTTFGHKRSPSGESLNRNIHLAGAKLVLPPTGELPTLK 983
            :...:|::|:        .|......:.:.....|:.:...|.:.|::
Zfish   506 STGFDSVLPS--------GPDIAQFKQGVKTVAGKMAVLANGVMNTIQ 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288
PH_ASAP 302..410 CDD:270071
ArfGap_ASAP 425..541 CDD:350063 35/116 (30%)
Ank_2 554..662 CDD:403870 22/150 (15%)
ANK repeat 586..622 CDD:293786 6/43 (14%)
ANK repeat 624..662 CDD:293786 5/65 (8%)
Ank_2 636..>693 CDD:403870 10/88 (11%)
SH3_ASAP 1095..1149 CDD:212755
arfgap2XP_005159305.1 PLN03114 1..498 CDD:178661 114/569 (20%)
ArfGap 13..117 CDD:279720 36/124 (29%)
TMF_DNA_bd 270..331 CDD:289127 14/67 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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