DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asap and arap1a

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_700481.5 Gene:arap1a / 571767 ZFINID:ZDB-GENE-030131-6226 Length:1092 Species:Danio rerio


Alignment Length:499 Identity:112/499 - (22%)
Similarity:189/499 - (37%) Gaps:136/499 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 LKSELRGVKGDMKRPFDKAAKDYEAKFIKIEKEKKAQAKEA-----------GMVRTEIDAAVVA 185
            ||.|  .|..||::.|      :..|.::.:||:....:|.           ..::.:....|.|
Zfish     3 LKKE--DVLRDMQKCF------FNLKTVEDKKEETITERERVDSIDIRCTEYPELKEDFRQIVKA 59

  Fly   186 EEMEK---------ERRLYQLQTCEYLLKYKDIKTKTGIELLQHLIEYYH----ALSNYFKDGLQ 237
            ..:||         :||..||.: |||..::.||            |.|.    :|.:.||    
Zfish    60 GWLEKTPPKGGRIYQRRWVQLDS-EYLRYFQSIK------------EVYSKRMVSLGSVFK---- 107

  Fly   238 TIEHFGTYIGDLSEKLHEIKQKQDEDRRSLLDLRTVL-RSTPDFERVDNVPSSESRSGGAGYSLH 301
                 ...:||:..:||.             ..||.| |:....||.|.|...|           
Zfish   108 -----VVSVGDVRFELHS-------------QSRTFLFRAENTQERDDWVSCIE----------- 143

  Fly   302 QLQGDKHHGVTRQGHLLKKSEGKVRRVWQKRRCRVTSDGFLDIFHADESKPPTRVNL-------- 358
            ::..|:.|.:..:....|  .|.|         .|:.:|:|::. :..:|..|.:|.        
Zfish   144 KILSDRKHSLEPRNLFFK--NGSV---------SVSFEGYLEML-SPRTKVYTLINRDKLFLFKS 196

  Fly   359 ------------LTCQIKPVPD--DKRGFDLISYNRPYHFQAEDEGDQKAWMAVLVNCKEKALTK 409
                        :..::..|.|  :||.|.|.:..|.:.|..:.|.:::.|...|..|..::|: 
Zfish   197 HEEYFQGMGITDIDMRMANVRDGENKRSFTLTTPYRAFSFMVDSESEKQRWCESLTECVSRSLS- 260

  Fly   410 AFQHANPQMSPSLVELQKTVIRYVQLLPGNDRCCDCGSRNDVTWISLNFGILVCIQCSGVHRDLG 474
                            ...|...|..:..|..|.||.| :...|.|:|..:|:|.:|:|.||:||
Zfish   261 ----------------CDGVCESVWRVQANRICADCSS-SMPEWASVNLCVLLCEKCAGAHRNLG 308

  Fly   475 VHHSRIQSLTLD-NLTTANLL-IARAMGNSTLNDIMEAKLGRG-KLQHESSMEERYDFIRAKYVA 536
            .:.|:::||.|| .:.|.:|: :...:||...|....|.:... :|...::.|:|...|..||..
Zfish   309 QNISKVRSLKLDERVWTDDLIRVFLMLGNGKANKFWGANIPPSERLSASANSEQRLKHITDKYKN 373

  Fly   537 KRY--VMRTCSDDNDLRCDLEQAVVNADMSQLLQVWAEGADLTC 578
            .:|  ..:.......|...|..|:.:||:.:.|.:...|||..|
Zfish   374 GKYRKYHKLFGQQEALNNALCLAMQSADLLETLTLLNCGADAAC 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288 30/140 (21%)
PH_ASAP 302..410 CDD:270071 24/129 (19%)
ArfGap_ASAP 425..541 CDD:350063 36/120 (30%)
Ank_2 554..662 CDD:403870 9/25 (36%)
ANK repeat 586..622 CDD:293786
ANK repeat 624..662 CDD:293786
Ank_2 636..>693 CDD:403870
SH3_ASAP 1095..1149 CDD:212755
arap1aXP_700481.5 PH 56..147 CDD:278594 31/136 (23%)
PH-like 57..149 CDD:302622 31/137 (23%)
PH-like 171..251 CDD:302622 15/80 (19%)
ArfGap 266..378 CDD:279720 35/112 (31%)
PH-like 463..566 CDD:302622
PH 465..567 CDD:278594
PH-like 580..660 CDD:302622
RhoGAP_ARAP 665..845 CDD:239850
UBQ 887..968 CDD:294102
PH-like 973..1090 CDD:302622
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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