DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asap and git1

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_697386.4 Gene:git1 / 568935 ZFINID:ZDB-GENE-100408-5 Length:761 Species:Danio rerio


Alignment Length:733 Identity:161/733 - (21%)
Similarity:251/733 - (34%) Gaps:208/733 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 CCDCGSRNDVTWISLNFGILVCIQCSGVHRDLGVHHSRIQSLTLDNLTTANLLIARAMGNSTLND 506
            |.|| |..|..|.|:|.|:|:|.:|..|||.||.|.|.::.|.......:.|.:.:.:.::..|.
Zfish    11 CADC-SAPDPGWSSINRGVLICDECCSVHRSLGRHISIVKHLRHSGWPPSLLQMVQTLASNGANS 74

  Fly   507 IMEAKL--------GRGKLQHESSME-ERYDFIRAKYVAKRYVMR-TCSDDNDLRCDLEQAVVNA 561
            |.|..|        ||.|...:..:. .:.:||||||....:|.: .|.||:        .|...
Zfish    75 IWEHSLLDPAQVQSGRRKPNPQDKVHPTKSEFIRAKYQMLAFVHKLPCRDDD--------GVTTK 131

  Fly   562 DMSQLLQVWAEGADLTCCLPSSDAGETALHLAVLREMGSTLHIVDFLIQNMPPKGLNKATNPAGL 626
            |:|:.|........|          ||.|.|..|....:..|         |.||          
Zfish   132 DLSKQLHSSVRTGSL----------ETCLRLLSLGAQANFFH---------PEKG---------- 167

  Fly   627 LDVTGKNTALHLCALHDRRECMKLLLRSGADYELKNSQNKTALDIAKEMGHNSCRE-LIECAIK- 689
                  .|.||:.|...:....:||:..|||....:...:|.:|.|::.||....| |:||..: 
Zfish   168 ------TTPLHVAAKAGQVLQAELLVVYGADPGAPDINGRTPIDYARQAGHVELAERLVECQYEL 226

  Fly   690 REKSAF-------DHINTDWNLPN-----------------------------------EDGSTD 712
            .::.||       ||.|..:.:|.                                   |:.:.|
Zfish   227 TDRLAFYLCGRRPDHKNGHYIIPQMADRARPKCPTQSLDLSELAKAAKKKLQALNNRLFEELAMD 291

  Fly   713 FSDDETVIDERKS----------------RSRPPSFAGGDSPVLRSRSSTCDSIQSSSSPIANCP 761
            ..|:   :|.|::                ||..|..     ||....|:|.:   .....:|...
Zfish   292 VYDE---VDRRENDAVWLTTQNHSTLVTERSAVPFL-----PVNPEYSATRN---QGRQKLARFN 345

  Fly   762 SRQFT-----LPSGLPSYTHSAG-TSPKQHISVGQYLGSATNVGGNGPGNGGSSPSSASSQSVRA 820
            :|:|.     :.|......|..| |||...:.:.|.        .:...:..|..|...:.|...
Zfish   346 AREFATLIIDILSDAKRRQHGKGLTSPTDPLDLSQV--------DDDQHDYDSVASDEDTDSELT 402

  Fly   821 ARNSLNMQSDLGGHVTGARKSTSTANMNSLKKRTAPAPPPGTL--------GSASSSSFYGTLPH 877
            |:|:.|.|.:      ...||..:::::.         .|.||        ..|||.:....|  
Zfish   403 AQNNNNTQRN------NRAKSMDSSDLSD---------GPITLQEYLEVKKALASSEAKVQQL-- 450

  Fly   878 PPRHSQNFDASDIRAINHKNQSLDVAYGTLPHLRSVESSPRG---GGG---YGYGVS-------Q 929
                        ::..|:.::.|......:..:::..|:.||   |.|   .|.||.       :
Zfish   451 ------------MKVNNNLSEELRRLQKEISRMQTENSALRGAQAGSGATMTGGGVPGHWPDRVR 503

  Fly   930 DPGGSGNGSNNSLMPAMTTFGHKRSPSGESLNRNIHLAGAKL---VLPPTGELPTLKHVDKSALT 991
            ..||.|..|.:|.:.|.::..|:|.....|:...:......|   :.|.|..|..|..|.|.|..
Zfish   504 GMGGGGGLSGDSSLIAPSSTPHRRDRQAFSMYEPVGTTSKVLSPALDPLTCRLQPLSPVRKGAPA 568

  Fly   992 RPKIPPPGPPSEREISNGQSNESISSMDEGPVAPPRKLVNQSANFPDYESWHTDMDSSGGGLDHS 1056
            .|  .|.|.......::|:.|...:....|           |....||::..|...|.|.|  .|
Zfish   569 GP--TPYGGAHLSASTDGRYNHPKAGEKYG-----------SGTDSDYDNSQTYDVSIGVG--RS 618

  Fly  1057 AESNVSSSDNDRLNSSPD 1074
            :|.: |..|.|.....||
Zfish   619 SEED-SRGDVDDTEGDPD 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288
PH_ASAP 302..410 CDD:270071
ArfGap_ASAP 425..541 CDD:350063 34/107 (32%)
Ank_2 554..662 CDD:403870 23/107 (21%)
ANK repeat 586..622 CDD:293786 9/35 (26%)
ANK repeat 624..662 CDD:293786 9/37 (24%)
Ank_2 636..>693 CDD:403870 17/58 (29%)
SH3_ASAP 1095..1149 CDD:212755
git1XP_697386.4 ArfGap 3..124 CDD:214518 36/113 (32%)
ANK <123..220 CDD:238125 31/139 (22%)
Ank_2 137..229 CDD:289560 29/126 (23%)
ANK repeat 137..165 CDD:293786 8/46 (17%)
ANK repeat 167..197 CDD:293786 10/45 (22%)
GIT_SHD <281..301 CDD:285690 5/22 (23%)
GIT_SHD 337..364 CDD:285690 4/26 (15%)
GIT_CC 416..479 CDD:293167 12/85 (14%)
GIT1_C 639..754 CDD:289013
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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