DRSC/TRiP Functional Genomics Resources

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Protein Alignment Asap and ArfGAP1

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster


Alignment Length:629 Identity:117/629 - (18%)
Similarity:186/629 - (29%) Gaps:232/629 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 ANPQMSPSLVELQKTVIRYVQLLPGNDRCCDCGSRNDVTWISLNFGILVCIQCSGVHRDLGVHHS 478
            |:|:....|.||:..        ..|.:|.:||:.|. .|:|:.:||.:|::|||.||.||||.|
  Fly     2 ASPRTRRVLQELKPQ--------DENSKCFECGTHNP-QWVSVTYGIWICLECSGKHRSLGVHLS 57

  Fly   479 RIQSLTLDNLTTANLLIARAMGNSTLNDIMEAKLGRGKLQHESSMEERYDFIRAKYVAKRYVMRT 543
            .::|:|:|......|...:|.||....:.:|                                  
  Fly    58 FVRSVTMDKWKDIELEKMKAGGNRNAREFLE---------------------------------- 88

  Fly   544 CSDDNDLRCDLEQAVVNADMSQLLQVWAEGADLTCCLPSSDAGETALHLAVLREMGSTLHIVDFL 608
              |..|                    |.|.|.:|....|..|       |:.|:..:|       
  Fly    89 --DQED--------------------WNERAPITQRYNSKAA-------ALYRDKIAT------- 117

  Fly   609 IQNMPPKGLNKATNPAGLLDVTGKNTALHLCALHDRRECMKLLLRSGADYELKNSQNKTALDIAK 673
                                                       |..|..::||.:|.:...:.:.
  Fly   118 -------------------------------------------LAQGKSWDLKEAQGRVGSNNSF 139

  Fly   674 EMGHNSCRELIECAIKREKSAFDHINTDWNLPNEDG----------STDFSDDETVIDERK---S 725
            ..|.:|     ..:.:...||..: ..:....|..|          :.:|.|.:.....|:   :
  Fly   140 SSGGSS-----NSSYQSRPSATGY-GGNGGYQNGGGAEPGGYQQYQTQEFKDQKEEFFSRRQVEN 198

  Fly   726 RSRP---PSFAGGD--------SPVLRSRS-----STCDSIQS-------SSSPIANCPSRQFTL 767
            .|||   |...||.        .|..:::|     ||..::.|       ::|.:|:....:...
  Fly   199 ASRPENLPPSQGGKYAGFGFTREPPPKTQSQELFDSTLSTLASGWSLFSTNASKLASTAKEKAVT 263

  Fly   768 PSGLPSYTHSAGT-SPKQHISVGQYLGSATNVGGNG----PGNGGSSPSSASSQSVRAARNSLNM 827
            ...|.|.....|| .......|.......|::|..|    .|:..|||....:.......::...
  Fly   264 TVNLASTKIKEGTLLDSVQCGVTDVASKVTDMGKRGWNNLAGSNISSPQGGYNDPNFEDSSAYQR 328

  Fly   828 QSDLGGHVTGARKSTSTA----------NMNSLKKRTAPAPPPGTLGSASSSSFYGTLPHPPRHS 882
            .:.:||::.|.....|..          |.||....|            ||||::..|       
  Fly   329 SNSVGGNLAGGLGQQSGVSDSDWGGWQDNGNSKSHMT------------SSSSYHNQL------- 374

  Fly   883 QNFDASDIRAINHKNQSLDVAYGTLPHLRSVESSPRGGGGYGYGVSQDPGGSGNGSNNSLMPAMT 947
                                            ||..|||....|:::|...||..:.|  ..:..
  Fly   375 --------------------------------SSSSGGGTASAGLTRDADWSGFEATN--YQSSE 405

  Fly   948 TFGHKRSPSGESLNRNIHLAGAKLVLPPTGELPTLKHVDKSALT 991
            |.....|..|.:..||:.|......|....|...:|.|.....|
  Fly   406 TSYQNASSGGSTARRNMKLQDTSQKLSEGFESLDVKSVKPKTAT 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288
PH_ASAP 302..410 CDD:270071
ArfGap_ASAP 425..541 CDD:350063 29/115 (25%)
Ank_2 554..662 CDD:403870 12/107 (11%)
ANK repeat 586..622 CDD:293786 3/35 (9%)
ANK repeat 624..662 CDD:293786 3/37 (8%)
Ank_2 636..>693 CDD:403870 7/56 (13%)
SH3_ASAP 1095..1149 CDD:212755
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 41/178 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464128
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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