DRSC/TRiP Functional Genomics Resources

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Protein Alignment Asap and Agap3

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_006236000.1 Gene:Agap3 / 362300 RGDID:1310751 Length:1093 Species:Rattus norvegicus


Alignment Length:495 Identity:120/495 - (24%)
Similarity:193/495 - (38%) Gaps:111/495 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 TYIGDLSEKLHEIKQKQDEDRRSLLDL--RTVLRSTPDFERVDNVPSSESRSGGAGYSLHQLQGD 306
            ||...|.:.:..|..|:.:..|:.:.:  :.:.|:||     ...|.:..| |..|.:|.: ...
  Rat   619 TYHPSLHDYMQNIHGKEIDLLRTTVKVPGKRLPRATP-----STAPGTSPR-GANGLALER-SNT 676

  Fly   307 KHHGVTRQGHLLKK----SEGKVRRVW--------QKRRCRVTS------------------DGF 341
            :..|.|.:.|....    ||...|..|        .:|.|.::|                  .|.
  Rat   677 QLGGTTGRPHSASSASLHSERPHRSAWAGSRPEGLHQRSCSISSTDQWSAAAALPASVQRPASGP 741

  Fly   342 LDIFHAD---ESKPPTRVNLLTCQIK-----PVPD--------DKRGFDLISYN---RPYHFQAE 387
            .::..:.   |..|..|.|....:.|     |.||        .:..|:.:..:   :.:||:|.
  Rat   742 AELLSSSPKLEPPPSPRSNRKKQRRKKSTGTPRPDGPNSAAEETEESFEFVVVSLTGQTWHFEAS 806

  Fly   388 DEGDQKAWMAVLVNCKEKALTKAFQHANPQMSPSLVELQKT--VIRYVQLLPGNDRCCDCGSRND 450
            ...:::.|    |...:..:..:.|........:.:..|.|  .::.|:...||..|.||.:.|.
  Rat   807 TAEERELW----VQSVQAQILASLQ
GCRSAKDKTRLGNQSTALAVQTVRTARGNSFCVDCEAPNP 867

  Fly   451 VTWISLNFGILVCIQCSGVHRDLGVHHSRIQSLTLDNLTTANLLIARAMGNSTLNDIMEAKL-GR 514
             .|.|||.|.|:||:|||:||.||.|.||::||.||:.....|.:..||||:..|.:.|..| |.
  Rat   868 -DWASLNLGALMCIECSGIHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALDGY 931

  Fly   515 GKLQHESSMEERYDFIRAKYVAKRYVMRTCSDDNDLRCDLEQAVVNADMSQLLQVWAEGADLTCC 579
            .|...|:..||:..:|||||..|.::....|.|..|...|.:|||..|:..|:.:.|.|:     
  Rat   932 SKPGPEACREEKERWIRAKYEQKLFLAPL
PSSDVPLGQQLLRAVVEDDLRLLVMLLAHGS----- 991

  Fly   580 LPSSDAGETALHLAVLREMGSTLHIVDFLIQNMPPKGLNKATNPAGLLDVTGKNTALHLCALHDR 644
              ..:..||         .|                            |..|: |||||.:....
  Rat   992 --KEEVNET---------YG----------------------------DGDGR-TALHLSSAMAN 1016

  Fly   645 RECMKLLLRSGADYELKNSQNKTALDIAKEMGHNSCRELI 684
            ....:||:..|.|...::::..|.|..|:..|...|.:::
  Rat  1017 VVFTQLLIWYGVDVRSRDARGLTPLAYARRAGSQECADIL 1056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288 2/4 (50%)
PH_ASAP 302..410 CDD:270071 25/156 (16%)
ArfGap_ASAP 425..541 CDD:350063 50/118 (42%)
Ank_2 554..662 CDD:403870 22/107 (21%)
ANK repeat 586..622 CDD:293786 3/35 (9%)
ANK repeat 624..662 CDD:293786 11/37 (30%)
Ank_2 636..>693 CDD:403870 12/49 (24%)
SH3_ASAP 1095..1149 CDD:212755
Agap3XP_006236000.1 small_GTPase 309..474 CDD:197466
Centaurin_gamma 311..468 CDD:133303
PH_AGAP 584..827 CDD:241281 39/218 (18%)
PH 587..>648 CDD:278594 6/28 (21%)
ArfGap 855..960 CDD:279720 47/105 (45%)
Ank_2 971..1061 CDD:289560 27/131 (21%)
ANK 971..>1060 CDD:238125 27/131 (21%)
ANK repeat 971..1001 CDD:293786 11/73 (15%)
ANK repeat 1003..1034 CDD:293786 10/31 (32%)
ANK repeat 1036..1061 CDD:293786 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D751525at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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