DRSC/TRiP Functional Genomics Resources

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Protein Alignment Asap and agap3

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_009295860.1 Gene:agap3 / 324332 ZFINID:ZDB-GENE-110927-1 Length:1295 Species:Danio rerio


Alignment Length:515 Identity:124/515 - (24%)
Similarity:204/515 - (39%) Gaps:122/515 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 LIEYYHALSNYFKD----------------GLQTIEHFGTYIGDLSEKLHEIKQKQDEDRRSLLD 269
            |:.|:.:|.:|.::                |.:......|.....|.|.:.:.:.     ||.|.
Zfish   811 LLTYHPSLHDYMQNVHGKEIDLLRTTVKVPGKRPPRAVATVAPTASPKTNGLTKD-----RSTLQ 870

  Fly   270 LRTVLRSTPDFERVDNVPSSESRSGG--AGYSLHQLQGDKHHGVTRQGHLLKKSEGKVRRVWQKR 332
            |.....|||     .:..||..:|||  ||.:|    |....|:.::...:..:|     .|.:.
Zfish   871 LGIGATSTP-----HSNSSSSLQSGGSTAGVAL----GTNKEGMHQRSFSVSSAE-----QWNEA 921

  Fly   333 RCRVTS-DGFLDIF--------------------HADESKPPTRVNLLTCQIKP--------VPD 368
            ....|| :|..|..                    ||:..|  .|....|...||        .|:
Zfish   922 VISTTSANGVSDPLSSASGMSSATSPKLEPPPSPHANRKK--HRRKKSTGITKPDSLSAGSEEPE 984

  Fly   369 DKRGFDLISY-NRPYHFQAEDEGDQKAWMAVLVNCKEKALTKAFQHANPQMSPSLVELQK--TVI 430
            :...|.::|. .:.:||:|....:::.|:..:    |..:..:.|......:.|.:..|.  ..|
Zfish   985 ESFEFIIVSLTGQMWHFEASTFEERELWVQAI----ESQILASLQSCESSKNKSRLGSQSDALAI 1045

  Fly   431 RYVQLLPGNDRCCDCGSRNDVTWISLNFGILVCIQCSGVHRDLGVHHSRIQSLTLDNLTTANLLI 495
            :.::.:.||..|.||.:.|. .|.|||.|.|:||:|||:||:||.|.||::||.||:......::
Zfish  1046 QSIRNVRGNSFCADCDAPNP-DWASLNLGALICIECSGMHRNLGTHLSRVRSLDLDDWPVELSMV 1109

  Fly   496 ARAMGNSTLNDIMEAKL-GRGKLQHESSMEERYDFIRAKYVAKRYVMRTCSDDNDLRCDLEQAVV 559
            ..|:||:..|.:.||.: |..|...:|:.||:..:|||||..|.:|:.....|..|...|.:|||
Zfish  1110 MTAIGNAMANSVWEACVDGYNKPGVDSTREEKERWIRAKYEQKLFVVALPQSDVPLGQQLLRAVV 1174

  Fly   560 NADMSQLLQVWAEGADLTCCLPSSDAGETALHLAVLREMGSTLHIVDFLIQNMPPKGLNKATNPA 624
            ..|:..::.:.|.|.       ..:..||         .|                         
Zfish  1175 EDDLRLVVLLLAHGT-------KEEVNET---------YG------------------------- 1198

  Fly   625 GLLDVTGKNTALHLCALHDRRECMKLLLRSGADYELKNSQNKTALDIAKEMGHNSCRELI 684
               |..|: |||||..........:||:..|.|.:.::::.:|.|..|:..|...|.:::
Zfish  1199 ---DGDGR-TALHLSCAMANVVITQLLIWYGVDVKSRDARGQTPLSYAQRAGSQECADIL 1254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288 6/43 (14%)
PH_ASAP 302..410 CDD:270071 23/137 (17%)
ArfGap_ASAP 425..541 CDD:350063 47/118 (40%)
Ank_2 554..662 CDD:403870 21/107 (20%)
ANK repeat 586..622 CDD:293786 3/35 (9%)
ANK repeat 624..662 CDD:293786 11/37 (30%)
Ank_2 636..>693 CDD:403870 12/49 (24%)
SH3_ASAP 1095..1149 CDD:212755
agap3XP_009295860.1 small_GTPase 507..672 CDD:197466
Centaurin_gamma 509..666 CDD:133303
PH_AGAP 778..1025 CDD:241281 46/238 (19%)
PH 781..>845 CDD:278594 5/33 (15%)
ArfGap 1044..1155 CDD:279720 46/111 (41%)
Ank_2 1190..1259 CDD:289560 19/103 (18%)
ANK 1199..>1259 CDD:238125 16/57 (28%)
ANK repeat 1201..1232 CDD:293786 10/31 (32%)
ANK repeat 1234..1259 CDD:293786 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D751525at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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