DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asap and Agfg2

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_006249202.1 Gene:Agfg2 / 304375 RGDID:1306590 Length:488 Species:Rattus norvegicus


Alignment Length:631 Identity:123/631 - (19%)
Similarity:190/631 - (30%) Gaps:253/631 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 GNDRCCDCGSRNDVTWISLNFGILVCIQCSGVHRDLGVHHSRIQSLTLDNLTTANLLIARAMGNS 502
            ||..|.:|..|. ||::.:..|..||..|||:.|.|...| |::|:::...|...:|..::.||.
  Rat    43 GNRHCFECAQRG-VTYVDITVGSFVCTTCSGLLRGLNPPH-RVKSISMTTFTEPEVLFLQSRGNE 105

  Fly   503 TLNDIMEAKLG----RGKLQHESSMEERY-DFIRAKYVAKRYVMRTCSDDNDLRCDLEQAVVNAD 562
            ....|.   ||    |..|..:|...::. :|::.||..||:.                      
  Rat   106 VCRKIW---LGLFDARTSLVPDSRDPQKVKEFLQEKYEKKRWY---------------------- 145

  Fly   563 MSQLLQVWAEGADLTCCLPSSDAGETALHLAVLREMGSTLHIVDFLIQNMPPKGLNKATNPAGLL 627
                                                             :||:.:..|:...|.:
  Rat   146 -------------------------------------------------VPPEQVKGASYSKGSV 161

  Fly   628 DVT--------GK--NTAL--HLCALHDRRECMKLLLRSGADYELKNSQNKTA-LDIAKEMGHNS 679
            ..|        ||  .|.|  .:.:|.|        ..|.:...:..||.:|| ...::...|:|
  Rat   162 SATPVQGSVPEGKPIRTLLGDPVPSLSD--------AASTSSQSVSQSQARTAQARSSQPPSHSS 218

  Fly   680 CRELIECAIKREKSAFDHINTDWNLPNEDGSTDFSDDETVIDERKSRSRPPSFA-----GGDSPV 739
            .::               .:||  |..:.|...|:..:..          |:||     ||.:| 
  Rat   219 TKK---------------ASTD--LLADIGGDPFAAPQVA----------PAFASFPGFGGQNP- 255

  Fly   740 LRSRSSTCDSIQSSSSPIANCPSRQF-TLPSGLPSYTHSAGTSPKQHISVGQYLGSATNVGGNGP 803
              |.....:....||||    .|..| :||..:.:...:..|.....:..|.|            
  Rat   256 --SHGGFANFDAFSSSP----SSSAFGSLPPSVQTPFQAQPTPAANRMLTGSY------------ 302

  Fly   804 GNGGSSPSSASSQSVRAARNSLNMQSDLGGHVTGARKSTSTANMNSLKKRTAPAPPPGTLGSASS 868
             :.|||..||...:..||.:..|..:|:||               .|:.|.|....||       
  Rat   303 -SFGSSQMSAFGVAPLAAASQPNSLADVGG---------------LLEPRMAAGGLPG------- 344

  Fly   869 SSFYGTLPHPPRHSQNFDASDIRAINHKNQSLDVAYGTL---------PHLRSVES-SPRG---G 920
             |.:|.....|....        |:.....|..:.:|..         |.|.|... .|.|   |
  Rat   345 -SVFGMPSQVPALQS--------AVPGVGGSTGLPFGAFTNPFTTPAQPQLPSTNPFQPNGIASG 400

  Fly   921 GGYGYGVSQDPGGSGNGSNNSLMPAMTTFGHKRSPSGESLNRNIHLAGAKLVLPPTGELPTLKHV 985
            .|||.| |..||        .|.||                            ||:|...:    
  Rat   401 PGYGMG-SVQPG--------LLQPA----------------------------PPSGAFAS---- 424

  Fly   986 DKSALTRPKIPPPGPPSEREISNGQSNESI-----SSMDEGPVAPP 1026
                    ..|.|..|::..:...|:..|.     |.:.:.|::.|
  Rat   425 --------TFPAPVFPTQAGLVEQQNGSSFGDLGTSKLGQRPLSQP 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288
PH_ASAP 302..410 CDD:270071
ArfGap_ASAP 425..541 CDD:350063 33/107 (31%)
Ank_2 554..662 CDD:403870 12/119 (10%)
ANK repeat 586..622 CDD:293786 3/35 (9%)
ANK repeat 624..662 CDD:293786 9/49 (18%)
Ank_2 636..>693 CDD:403870 10/59 (17%)
SH3_ASAP 1095..1149 CDD:212755
Agfg2XP_006249202.1 ArfGap 40..152 CDD:295313 35/184 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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