DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asap and Smap2

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001094139.1 Gene:Smap2 / 298500 RGDID:1308418 Length:428 Species:Rattus norvegicus


Alignment Length:545 Identity:125/545 - (22%)
Similarity:196/545 - (35%) Gaps:150/545 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 KTVIRYVQLLPG------NDRCCDCGSRNDVTWISLNFGILVCIQCSGVHRDLGVHHSRIQSLTL 485
            |.|.||..:|..      |..|.||.|:.. .|.|.|.|:.:||:|:|:||:||||.||::|:.|
  Rat     7 KDVDRYQAVLANLLLEEDNKFCADCQSKGP-RWASWNIGVFICIRCAGIHRNLGVHISRVKSVNL 70

  Fly   486 DNLTTANLLIARAMGNSTLNDIMEAKLGR--GKLQHESSMEERYDFIRAKYVAKRYVMRTCSDDN 548
            |..|...:...:.|||...|.:.||.|..  .:.|.:.::|   .|||.||..|:|:.|:. |.|
  Rat    71 DQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVE---GFIRDKYEKKKYMDRSL-DIN 131

  Fly   549 DLRCDLEQAVVNADMSQLLQVWAEGADLTCCLPSSDAGETALHLAVLREMGSTLHIVDFLIQNMP 613
            .||.:.:..            |..|        |..|.|..:...|..::.......|   ..:|
  Rat   132 VLRKEKDDK------------WKRG--------SEPAPEKKMEPVVFEKVKMPQKKED---AQLP 173

  Fly   614 PKGLNKATNPAGLLDVTGKNTALHLCALHDRRECMKLLLRSGADYELKNSQNKTALD-----IAK 673
            .|...|:..|  ::|:.|.:..: .|:                   :.||:...||:     :|.
  Rat   174 RKSSPKSAAP--VMDLLGLDAPV-ACS-------------------IANSKTSNALEKDLDLLAS 216

  Fly   674 EMGHNSCRELIECAIKREKSAFDHINTDWNLPNEDGSTDFSDDETVIDERKSRSRPP--SFAGGD 736
            ....:|.......::....|| ..:..:.||..|.||   ..:||   .:|..|:..  |..|..
  Rat   217 VPSPSSVSRKAVGSMPTAGSA-GSVPENLNLFPEPGS---KSEET---GKKQLSKDSILSLYGSQ 274

  Fly   737 SPVLRSRSSTCDSIQSSSSPIANCPSRQFTLPSGLPSYTHSAGTSPKQHISVGQYL----GSATN 797
            :|            |..:..:...|: |...|:..||:   .|.:|...| :|..:    |...:
  Rat   275 TP------------QMPAQAMFMAPA-QMAYPTAYPSF---PGVTPPNSI-MGSMMPPPVGMVAH 322

  Fly   798 VGGNGPGNGGSSPSSASSQSVRAARNSLNMQSDLGGHVTGARKSTSTANMNSLKKRTAPAPPPGT 862
            .|.:|.....:.|:....          .||:.:.|..:|...:.....|.|:            
  Rat   323 PGASGMVTPMAMPAGYMG----------GMQASMAGVPSGMMTTQQAGYMASM------------ 365

  Fly   863 LGSASSSSFYGTLPHPPRHSQNFDASDIRAINHKNQSLDVAYGTLPHLRSVESSPRGGGGYG--- 924
              :|...:.||..|                    .|.|..      :|..:.....|...||   
  Rat   366 --AAMPQTVYGVQP--------------------AQQLQW------NLTQMTQQMAGMNFYGANG 402

  Fly   925 ---YGVSQDPGGSGNGSNNSLMPAM 946
               ||.|.. ||:|..:|.:|.|.|
  Rat   403 MMSYGQSMG-GGNGQAANQTLSPQM 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288
PH_ASAP 302..410 CDD:270071
ArfGap_ASAP 425..541 CDD:350063 46/121 (38%)
Ank_2 554..662 CDD:403870 14/107 (13%)
ANK repeat 586..622 CDD:293786 6/35 (17%)
ANK repeat 624..662 CDD:293786 3/37 (8%)
Ank_2 636..>693 CDD:403870 7/61 (11%)
SH3_ASAP 1095..1149 CDD:212755
Smap2NP_001094139.1 ArfGap_SMAP2 16..122 CDD:350083 40/109 (37%)
PBP1 <102..419 CDD:227507 84/440 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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