DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asap and Agap3

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_006535736.1 Gene:Agap3 / 213990 MGIID:2183446 Length:1093 Species:Mus musculus


Alignment Length:593 Identity:132/593 - (22%)
Similarity:224/593 - (37%) Gaps:151/593 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 IEKEKKAQAKEAGMVRTEIDAAVVAEEMEKERRLYQLQTCEYLLKYKDIKTKTGIELLQHLIEYY 225
            |.|:.|.        |:.|..:....::::|::..:.:. :.:...:.|..|.||.|.:.    .
Mouse   546 IRKQSKR--------RSNIFTSRKGADLDREKKAAECRV-DSIGSGRAIPIKQGILLKRS----G 597

  Fly   226 HALSNYFKDGLQTIEHFG--TYIGDLSEKLHEIKQKQDEDRRSLLDL--RTVLRSTPDFERVDNV 286
            .:|:..:|....|:...|  ||...|.:.:..|..|:.:..|:.:.:  :.:.|:||     ...
Mouse   598 KSLNKEWKKKYVTLCDNGLLTYHPSLHDYMQNIHGKEIDLLRTTVKVPGKRLPRATP-----TTA 657

  Fly   287 PSSESRSGGAGYSLHQLQ-----GDKHHGVTRQGHLLKKSEGKVRRVW----------QKRRCRV 336
            |.:..|:.|........|     |..|...:...|    ||......|          .:|.|.|
Mouse   658 PGTSPRANGLAMERSNTQLGGATGAPHSASSTSLH----SERPHSSAWAGSRPGPEGLHQRSCSV 718

  Fly   337 TS-DGFLDIF-----------------------------HADESKPPTRVNLLTCQIKPVPDD-- 369
            :| |.:.:..                             |::..|...:.:..|    |.||.  
Mouse   719 SSTDQWSEAAALPASMQHPASGPAESLSSSPKLEPPPSPHSNRKKHRGKKSTGT----PRPDGPS 779

  Fly   370 ------KRGFDLISYN---RPYHFQAEDEGDQKAW--------MAVLVNCKEKALTKAFQHANPQ 417
                  :..|:.:..:   :.:||:|....:::.|        :|.|..|:.........:.|..
Mouse   780 SAAEEAEESFEFVVVSLTGQTWHFEASTAEERELWVQSVQAQILASLQGCRSAKDKTRLGNQNTA 844

  Fly   418 MSPSLVELQKTVIRYVQLLPGNDRCCDCGSRNDVTWISLNFGILVCIQCSGVHRDLGVHHSRIQS 482
            ::          ::.|:.:.||..|.||.:.|. .|.|||.|.|:||:|||:||.||.|.||::|
Mouse   845 LA----------VQAVRTVRGNSLCIDCEAPNP-DWASLNLGALMCIECSGIHRHLGAHLSRVRS 898

  Fly   483 LTLDNLTTANLLIARAMGNSTLNDIMEAKL-GRGKLQHESSMEERYDFIRAKYVAKRYVMRTCSD 546
            |.||:.....|.:..||||:..|.:.|..| |..|...|:..||:..:|||||..|.::....|.
Mouse   899 LDLDDWPPELLAVMTAMGNALANSVWEGALDGYSKPGPEACREEKERWIRAKYEQKLFLAPLPSS 963

  Fly   547 DNDLRCDLEQAVVNADMSQLLQVWAEGADLTCCLPSSDAGETALHLAVLREMGSTLHIVDFLIQN 611
            |..|...|.:|||..|:..|:.:.|.|:       ..:..||         .|            
Mouse   964 DVPLGQQLLRAVVEDDLRLLVMLLAHGS-------KEEVNET---------YG------------ 1000

  Fly   612 MPPKGLNKATNPAGLLDVTGKNTALHLCALHDRRECMKLLLRSGADYELKNSQNKTALDIAKEMG 676
                            |..|: |||||.:........:||:..|.|...::::..|.|..|:..|
Mouse  1001 ----------------DGDGR-TALHLSSAMANVVFTQLLIWYGVDVRSRDARGLTPLAYARRAG 1048

  Fly   677 HNSCRELI 684
            ...|.:::
Mouse  1049 SQECADIL 1056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288 17/89 (19%)
PH_ASAP 302..410 CDD:270071 26/171 (15%)
ArfGap_ASAP 425..541 CDD:350063 48/116 (41%)
Ank_2 554..662 CDD:403870 22/107 (21%)
ANK repeat 586..622 CDD:293786 3/35 (9%)
ANK repeat 624..662 CDD:293786 11/37 (30%)
Ank_2 636..>693 CDD:403870 12/49 (24%)
SH3_ASAP 1095..1149 CDD:212755
Agap3XP_006535736.1 Centaurin_gamma 310..467 CDD:133303
PH_AGAP 583..827 CDD:241281 45/260 (17%)
PRK07003 <645..>756 CDD:235906 18/119 (15%)
ArfGap_AGAP3 843..952 CDD:350080 46/119 (39%)
Ank_2 971..1061 CDD:372319 27/131 (21%)
ANK repeat 971..1001 CDD:293786 11/73 (15%)
ANK repeat 1003..1034 CDD:293786 10/31 (32%)
ANK repeat 1036..1061 CDD:293786 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D751525at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.