DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asap and Arap3

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_006525549.1 Gene:Arap3 / 106952 MGIID:2147274 Length:1539 Species:Mus musculus


Alignment Length:1222 Identity:239/1222 - (19%)
Similarity:364/1222 - (29%) Gaps:505/1222 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PTTSTFASRMPDC----------------RHTIGVLEERLEFDREGLTKLKKAVKAIHNSGNTHV 70
            |||.|.....|.|                |...||.:||.|..|:.|...:.|..|         
Mouse   190 PTTGTVHIMDPGCLYYGVQPVGIPGASDRRDGRGVCQERAEHSRQDLETREDAGYA--------- 245

  Fly    71 DNEMFMVRALERLGGKVIE---QD---EPDIGAAFLKFSVVTKE----LSALMKTLMQNINNI-- 123
                    :||..|..::.   ||   ..|:.:.:..||.....    ||..:..|....|.:  
Mouse   246 --------SLELPGDSILSLPTQDAETSDDLISPYASFSSTADRPVPLLSGWLDKLSPQGNYVFQ 302

  Fly   124 ---VMFPVDSMLKSELRGVKGDMKRPFDKAAKDYEA-KFIKIEKEKKAQAKEAGMVRTEIDAAVV 184
               |.|...|::      ..|..|.||.|......| :..:..|:.|.|      |.|.....|.
Mouse   303 RRFVQFNGRSLM------YFGSDKDPFPKGVIPLTAIEMTRSSKDNKFQ------VITGQRVFVF 355

  Fly   185 AEEMEKERRLY--QLQTC---EYLLKY-------KDIKTKTGIELLQHLIEYYHALSNYFKDGLQ 237
            ..|.|.:|.|:  .||:|   :.||.:       :.::|.| :||..|..:.:.||         
Mouse   356 RTESEAQRDLWCSTLQSCLKEQRLLGHPRPPHPPRPLRTGT-LELRGHKAKVFAAL--------- 410

  Fly   238 TIEHFGTYIGDLSEKLHEIKQKQDEDRRSLLDLRTVLRSTPDFERVDNVPSSESRSGGAGYSLHQ 302
                   ..|:|:  |::                                |.::.|.|.|....:
Mouse   411 -------IPGELA--LYK--------------------------------SEQAFSLGIGICFIE 434

  Fly   303 LQGDKHHGVTRQGHLLKKSEGKVRRVWQKRRCRVTSDGFLDIFHADESKPPTRVNLLTCQIKPVP 367
            |||                            |.|.           |:|                
Mouse   435 LQG----------------------------CSVR-----------ETK---------------- 444

  Fly   368 DDKRGFDLISYNRPYHFQAEDEGDQKAWMAVLVNCKEKALTKAFQHANPQMSPSLVELQKTVIRY 432
              .|.|||::.:|.:.|.||..|.:::|.|.|    ::|:|:...             ...|...
Mouse   445 --SRSFDLLTPHRCFSFTAESGGARQSWAAAL----QEAVTETLS-------------DYEVAEK 490

  Fly   433 VQLLPGNDRCCDC-GSRNDVTWISLNFGILVCIQCSGVHRDLGVHHSRIQSLTLDNLTTANLLIA 496
            |...|.|..|.|| .||.|  |.::|.|:::|.||:|.||.||...|::|||.||....:|.::.
Mouse   491 VWSNPANRHCADCRASRPD--WAAVNLGVVICKQCAGQHRALGSGISKVQSLKLDTSVWSNEIVQ 553

  Fly   497 R--AMGNSTLNDIMEAKLGRGK-LQHESSMEERYDFIRAKYVAKRYVMRTCSDDNDLRCDLEQAV 558
            .  .:||...|......|..|: |..:|:...|.:||..||  |..:.|.....:.....|.||:
Mouse   554 LFIVLGNDRANCFWAGALPPGEGLHPDSAPGPRGEFISRKY--KLGLFRKPHPRHPDHSQLLQAL 616

  Fly   559 VNA--------DMSQLLQVWAEGADLTCCLPSSDAGETALHLAVLREMGSTLHIVDFLIQNMPPK 615
            ..|        :|:|||           |:.:|: ||..|..:.|.  ||.|.    |:.:..|.
Mouse   617 CAAMAGPNLLKNMAQLL-----------CVETSE-GEEPLSPSALN--GSLLS----LLPSDSPG 663

  Fly   616 GLNKATNPAGLLDVTGKNTALHLCALHDRRECMKLLLRSGADYELKNSQNKTALDIAKEMGHNSC 680
            ..|:...||                                                      :.
Mouse   664 VYNEVVVPA------------------------------------------------------TY 674

  Fly   681 RELIECAIKREKSAFDHINTDWNLPNEDGSTDFSDDETVIDERKSRSRPPSFAGGDSP-----VL 740
            |..:.|.               ::.|:.|:                  ||...|.|:|     ||
Mouse   675 RGFLYCG---------------SISNKAGA------------------PPLRRGRDAPPRLWCVL 706

  Fly   741 RSRSSTCDSIQSSSSPIANCPSRQFTLPSGLPSYTHSAGTSPKQHISVGQYLGSATNVGGNGPGN 805
               .:..:...|.|||          .|..|        ..|:..:.:|                
Mouse   707 ---GAALEMFASESSP----------EPLSL--------LQPQDIVCLG---------------- 734

  Fly   806 GGSSPSSASSQSVRAARNSLNMQSDLGGHVTGARKSTSTANMNSLKKRTAPAPPPGTLGSASSSS 870
                                                              .:|||...|......
Mouse   735 --------------------------------------------------VSPPPADPGDLDRFP 749

  Fly   871 FYGTLPHPPRHSQNF--DASDIRAINHKNQSLDVAYGTLPHLRSVESSPRGGGGYGYGVSQDPGG 933
            |...|.......|:|  |.:|                      |:|:.....|.:...:|     
Mouse   750 FSFELILTGGRIQHFATDGAD----------------------SLEAWISAVGKWFSPLS----- 787

  Fly   934 SGNGSNNSLMPAMTTFGH--KRSPSGESLNRNIHLAGAKLV------LPPTGELPTLKHVDKSAL 990
                .:..|.|.:...|.  .||||...|...:.|:|..|:      |.|.              
Mouse   788 ----CHQLLGPGLLRMGRLWLRSPSHAGLAPGLWLSGFGLLRGDHLFLCPA-------------- 834

  Fly   991 TRPKIPPPGPPSEREISNGQSNESIS--SMDEGP--------VAPPRKLVNQSANFPDYESWHTD 1045
                 |.||||:..::.:.:..:.||  |..:.|        |...|.|..|.....|:.:|:|.
Mouse   835 -----PGPGPPAPEDMVHLRRLQEISVVSAADTPDKKEHLVLVETGRTLYLQGEGRLDFAAWNTA 894

  Fly  1046 M-DSSGGGLDHSAESNVSSSDNDRLNSSPDNPSKTGGAGLGGKFHYNG--QRRCRALYDCVADND 1107
            : .::|||.....|..:|..|...:..:..:.....|..|.|.:...|  .|..|.|        
Mouse   895 IGGAAGGGGTGLQEQQMSRGDIPIIVDACISFVTQHGLRLEGVYRKGGARARSLRLL-------- 951

  Fly  1108 DELEFKEGEILIVLNERTDDENWMEGIIEGQPTRKGMF-----PVSFVHMLP 1154
              .||:.....:.|..|   |:::|.:.:   |.|..|     ||:...:||
Mouse   952 --AEFRRDARSVKLRPR---EHFVEDVTD---TLKRFFRELDDPVTSARLLP 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288 54/241 (22%)
PH_ASAP 302..410 CDD:270071 21/107 (20%)
ArfGap_ASAP 425..541 CDD:350063 41/119 (34%)
Ank_2 554..662 CDD:403870 22/115 (19%)
ANK repeat 586..622 CDD:293786 10/35 (29%)
ANK repeat 624..662 CDD:293786 1/37 (3%)
Ank_2 636..>693 CDD:403870 2/56 (4%)
SH3_ASAP 1095..1149 CDD:212755 13/58 (22%)
Arap3XP_006525549.1 SAM_Arap1,2,3 4..66 CDD:188889
PHA03247 <81..312 CDD:223021 30/138 (22%)
PH1_ARAP 285..377 CDD:270073 26/103 (25%)
PH2_ARAP 392..475 CDD:270074 33/194 (17%)
ArfGap_ARAP3 485..600 CDD:350089 41/118 (35%)
PH-like 671..783 CDD:388408 34/307 (11%)
PH-like 798..891 CDD:388408 25/111 (23%)
RhoGAP_ARAP 906..1081 CDD:239850 23/106 (22%)
Ubiquitin_like_fold 1113..1210 CDD:391949
PH5_ARAP 1210..1326 CDD:270079
PLN02983 <1472..>1538 CDD:215533
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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