DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asap and agap1

DIOPT Version :9

Sequence 1:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_004917925.2 Gene:agap1 / 100485248 XenbaseID:XB-GENE-981023 Length:1203 Species:Xenopus tropicalis


Alignment Length:465 Identity:112/465 - (24%)
Similarity:179/465 - (38%) Gaps:132/465 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 STPDFERVD-------NVPSSESRSGGAGYSLHQLQGDKHHG----------------------- 310
            |...|.|:|       :|.|::..|.||..:...:..|...|                       
 Frog   775 SLGSFSRMDGMHQRSYSVSSADQWSEGAVIANSAISSDTGLGDSVCSSPSISSTTSPKLDPPPSP 839

  Fly   311 -VTRQGHLLKKS-------------EGKVRRVWQKRRCRVTSDGFLDIFHADESKPPTRVNLLTC 361
             ..|:.|..|||             |.| |:.|:..|.....:.:....:.:|.           
 Frog   840 HANRKKHRRKKSTSNFKADGLSSTAEAK-RKAWKLNRVGSLRNVYSSNANTEEQ----------- 892

  Fly   362 QIKPVPDDKRGFDLISY-NRPYHFQAEDEGDQKAWMAVLVNCKEKALTKAFQHANPQMSPSLVEL 425
                  ::...|.::|. ::.:||:|....::.||:..:    |..:..:.|......:.|.:..
 Frog   893 ------EENFEFIIVSLTSQSWHFEATSYEERDAWVQAI----ESQILASLQSCESSKNKSRLTS 947

  Fly   426 QK--TVIRYVQLLPGNDRCCDCGSRNDVTWISLNFGILVCIQCSGVHRDLGVHHSRIQSLTLDNL 488
            |.  ..::.::.||||..|.||.::|. .|.|||.|.|:||:|||:||:||.|.||::||.||:.
 Frog   948 QNEALALQSIRNLPGNSHCVDCDAQNP-DWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDW 1011

  Fly   489 TTANLLIARAMGNSTLNDIME-AKLGRGKLQHESSMEERYDFIRAKYVAKRYVMRTCSDDNDLRC 552
            ....:.:..|:||...|.:.| :..|..|...||..||:..:|||||..|.::......|..|..
 Frog  1012 PPELIKVMSAIGNELANSVWEGSSQGHVKPCSESPREEKERWIRAKYEQKLFLSPLPCRDLPLGQ 1076

  Fly   553 DLEQAVVNADMSQLLQVWAEGA----DLTCCLPSSDAGE----TALHLAVLREMGSTLHIVDFLI 609
            .|.:|....|:..::.:.|.|:    :.||       ||    |:||||.               
 Frog  1077 QLLRATAEEDLRAVILLLAHGSREEVNETC-------GEGDRRTSLHLAC--------------- 1119

  Fly   610 QNMPPKGLNKATNPAGLLDVTGKNTALHLCALHDRRECMKLLLRSGADYELKNSQNKTALDIAKE 674
                .||                |..|           ::||:..|.|...::....|||..||:
 Frog  1120 ----RKG----------------NVVL-----------VQLLIWYGVDVMARDFHGNTALAYAKQ 1153

  Fly   675 MGHNSCRELI 684
            ...:..|||:
 Frog  1154 AVTSEVRELL 1163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288
PH_ASAP 302..410 CDD:270071 21/145 (14%)
ArfGap_ASAP 425..541 CDD:350063 48/118 (41%)
Ank_2 554..662 CDD:403870 22/115 (19%)
ANK repeat 586..622 CDD:293786 9/39 (23%)
ANK repeat 624..662 CDD:293786 6/37 (16%)
Ank_2 636..>693 CDD:403870 13/49 (27%)
SH3_ASAP 1095..1149 CDD:212755
agap1XP_004917925.2 Centaurin_gamma 382..543 CDD:133303
PH_AGAP 658..934 CDD:241281 30/180 (17%)
ArfGap_AGAP 953..1059 CDD:350065 45/106 (42%)
ANK repeat 1078..1108 CDD:293786 7/36 (19%)
Ank_5 1093..1151 CDD:404699 22/110 (20%)
ANK repeat 1110..1141 CDD:293786 13/76 (17%)
ANK repeat 1143..1168 CDD:293786 8/21 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D751525at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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