DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul4 and Cul4a

DIOPT Version :10

Sequence 1:NP_610352.2 Gene:Cul4 / 35780 FlyBaseID:FBgn0033260 Length:821 Species:Drosophila melanogaster
Sequence 2:NP_666319.2 Gene:Cul4a / 99375 MGIID:1914487 Length:759 Species:Mus musculus


Alignment Length:759 Identity:488/759 - (64%)
Similarity:590/759 - (77%) Gaps:10/759 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 GGSHGEIRTASTTSNLLNRMGAIHN--SKPGDV---KKIVIKNFKDKPTLPDNYSKDTYVKLEEA 128
            |...|.:......:|.|.:..|:..  :|||..   :|:|||||:|:|.|||||::||:.||.||
Mouse     5 GPRKGSVSALMGRTNGLTKPAALAGGPAKPGGTGGSRKLVIKNFRDRPRLPDNYTQDTWRKLHEA 69

  Fly   129 VIAIQLSKPIKYSLEELYQAVVNMCSHKMDAQLYAKLKELTEQHVKRNI-KLKELTGGSMDKLIL 192
            |.|||.|..|:|:||||||||.|:||||:...||.:|:::.|.||:..| ..:|   .|:|.::.
Mouse    70 VKAIQSSTSIRYNLEELYQAVENLCSHKVSPTLYKQLRQVCEDHVQAQILPFRE---DSLDSVLF 131

  Fly   193 LEKINHWWLSFCQQMIMIRSIFLYMDRTYVLQNSTVHSIWDMGLDLFRIHFAQNSVVQKRTVDGL 257
            |:|||..|...|:||||||||||::|||||||||.:.|||||||:|||.|...:.:||.:|:||:
Mouse   132 LKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHIISDRMVQSKTIDGI 196

  Fly   258 LTLIEKERQGSTVDRGLLKSLVRMLCDLQIYTSSFEEKFLDATNQLYKAESQRKMQELEVPEYLQ 322
            |.||.:||.|..|||.||:||:.||.|||:|..|||.|||:.||.||.||.||.||:.||||||.
Mouse   197 LLLIGRERSGEAVDRSLLRSLLSMLSDLQVYKDSFELKFLEETNCLYAAEGQRLMQDREVPEYLN 261

  Fly   323 HVNKRLAEENERLRHYLDSSTKHPLIYNVEKELLAEHLTSILQKGLDSLLEDNRLSDLTLLYGLL 387
            ||:|||.||.:|:..|||.||:.|||..|||:||.||||:||||||:.||::||:.|||.:|.|.
Mouse   262 HVSKRLEEEADRVITYLDHSTQKPLIACVEKQLLGEHLTAILQKGLEHLLDENRVPDLTQMYQLF 326

  Fly   388 SRVKNGTSELCGNFNGFIKKKGRTIVIDPEKDKSMVQDLLDFKDKMDVIVRTCFEHNEKFTNSLR 452
            ||||.|...|..:::.:||..|.||||:|||||.|||||||||||:|.:|..||:.||:|.|.::
Mouse   327 SRVKGGQHALLQHWSEYIKTFGTTIVINPEKDKDMVQDLLDFKDKVDHVVEVCFQRNERFINLMK 391

  Fly   453 EAFEFFINQRANKPAELIAKYVDMKLRSGNKGTTDEELEKTLDKIMVLFRFIHGKDVFEAFYKKD 517
            |:||.|||:|.|||||||||:||.|||:|||..||||||:.|||||:||||||||||||||||||
Mouse   392 ESFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELERILDKIMILFRFIHGKDVFEAFYKKD 456

  Fly   518 LAKRLLVGKSASVDSEKSMLSKLKQECGGGFTSKLEGMFKDMELSRDINIAFRGHALSNNRDVHN 582
            ||||||||||||||:|||||||||.|||..|||||||||||||||:||.:.|:.| :.|......
Mouse   457 LAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQH-MQNQSAPGP 520

  Fly   583 LDLCVSILTMGYWPTYAPTEVTMPPQFINPQQIFNKFYLEKHSGRKLQWQPTLGNCMLRAQFDAG 647
            :||.|:||||||||||.|.||.:||:.:..|::|..|||.||||||||||.|||:.:|:|.|..|
Mouse   521 IDLTVNILTMGYWPTYTPMEVHLPPEMVRLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKADFKEG 585

  Fly   648 PKELLVSLFQALVLLLFNDKPVLSYEEILAATLIEDGELRRTLQSLACGRARVITKTPKGREILD 712
            .||..|||||.||||:||:....|:|||..||.|||.||||||||||||:|||:.|:|||:|:.|
Mouse   586 KKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLIKSPKGKEVED 650

  Fly   713 GDQFDFNNEFTNKLFRIKINQIQMKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLL 777
            ||:|.||.:|.:|||||||||||||||.|||.:|.|||||||||||||||||||||||||.||||
Mouse   651 GDKFIFNADFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLL 715

  Fly   778 ITELFNQLTFPVKPADLKKRIESLIDRDYMERDKDNQNQYNYVA 821
            ::||:|||.|||||.||||||||||||||||||||:.|||:|||
Mouse   716 VSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDSPNQYHYVA 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul4NP_610352.2 Cullin 124..722 CDD:459983 380/598 (64%)
Cullin_Nedd8 753..813 CDD:463146 53/59 (90%)
Cul4aNP_666319.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..40 8/34 (24%)
Cullin 63..660 CDD:459983 380/600 (63%)
Cullin_Nedd8 688..753 CDD:214883 57/64 (89%)

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