DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul4 and AT4G12100

DIOPT Version :10

Sequence 1:NP_610352.2 Gene:Cul4 / 35780 FlyBaseID:FBgn0033260 Length:821 Species:Drosophila melanogaster
Sequence 2:NP_192947.1 Gene:AT4G12100 / 826818 AraportID:AT4G12100 Length:434 Species:Arabidopsis thaliana


Alignment Length:382 Identity:91/382 - (23%)
Similarity:168/382 - (43%) Gaps:41/382 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 IHNSKPGDVK------KIVIKNFKD--KPTLPDNYSKDTYVKLEEAVIAIQLSKPIKYSLEELYQ 147
            |.|..|..||      |:.:....|  ||.:......|.|.|..:.:           ....:::
plant    58 IFNLDPNSVKDTQDRNKLYLAKAWDLLKPAIKIILDDDEYKKPGDVL-----------CFTTIFR 111

  Fly   148 AVVNMC--SHKMDAQLYAKLKELTEQHVKRNIK-LKELTGGSMDKLILLEKINHWWLSFCQQMIM 209
            ||...|  ..:....::..:|...|.|:...|: |::...||.|..:.|..:.:.||.|.::|.:
plant   112 AVKRACLGDPRQSELVFNLVKHECEPHIAELIQSLEKNCSGSDDPSVFLPHVYNRWLDFKRKMSL 176

  Fly   210 IRSIFLYMDRTYVLQNSTVHSIWDMGLDLFRIHFAQNSVVQKRTVDGLLTLIEKERQGSTVDR-- 272
            :..:.:|       |.....::||:|..||....:....:|.:.:.|:|.||..||.|...:.  
plant   177 VSDVAMY-------QTLNGLTLWDVGQKLFHKQLSMAPQLQDQVITGILRLITDERLGKAANNTS 234

  Fly   273 GLLKSLVRMLCDLQIYTSSFEEKFLDATNQLYKAESQRKMQELEVPEYLQHVNKR-LAEENERLR 336
            .|||:|:.|.......|..:::.|||:|::.|..|:::.:|..::..||::|.:. ||||.:..:
plant   235 DLLKNLMDMFRMQWQCTYVYKDPFLDSTSKFYAEEAEQVLQRSDISHYLKYVERTFLAEEEKCDK 299

  Fly   337 HYLDSSTKHPLIYNVEKELLAEHLTSILQKGLDSLLEDNRLSDLTLLYGLLSRVKNGTSELCGNF 401
            ||...|:....:..|.|..|.|..:|.|::|...|::::.:.||..:|.|.|.|.:         
plant   300 HYFFFSSSRSRLMKVLKSQLLEAHSSFLEEGFMLLMDESLIDDLRRMYRLFSMVDS--------- 355

  Fly   402 NGFIKKKGRTIVIDPEKDKSMVQDLLDFKDKMDVIVRTCFEHNEKFTNSLREAFEFF 458
            ..:|.:..|..::...:.......|.:....:|.|...||..::....::|:.||.|
plant   356 EDYIDRILRAYILAKGEGARQEGSLQELHTSIDKIWHQCFGQDDLLDKTIRDCFEGF 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul4NP_610352.2 Cullin 124..722 CDD:459983 80/341 (23%)
Cullin_Nedd8 753..813 CDD:463146
AT4G12100NP_192947.1 Cullin 81..>412 CDD:459983 84/357 (24%)
Blue background indicates that the domain is not in the aligned region.

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