DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul4 and AT3G46910

DIOPT Version :10

Sequence 1:NP_610352.2 Gene:Cul4 / 35780 FlyBaseID:FBgn0033260 Length:821 Species:Drosophila melanogaster
Sequence 2:NP_190275.1 Gene:AT3G46910 / 823844 AraportID:AT3G46910 Length:247 Species:Arabidopsis thaliana


Alignment Length:241 Identity:60/241 - (24%)
Similarity:105/241 - (43%) Gaps:34/241 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 KPTLPDN-------YSKDTYVKLEEAVIAIQLSKPIKYSLEELYQAV-VNMCSHKMDAQLYAKLK 166
            ||.:|..       |.:|.:..|:.|:.||.|.:|..::...|:.|| .:.|.......||..:.
plant    11 KPIIPHTPKPDSRIYVEDAWTMLKPAIRAIFLDEPQDFACSGLFNAVNKSWCEKSSGEALYKLIL 75

  Fly   167 ELTEQHVKRNIKLKELTGGSMDKLILLEKINHWWLSFCQQMIMIRSIFLYMDRTYVLQNSTV--H 229
            |..|.::...|:..| :....|..:.|..:...||.|.:::..:.||       ...:..||  |
plant    76 EECEIYISAAIQSLE-SQCDTDPSLFLSLLEKCWLDFRRKLQFLCSI-------AGGEGQTVGPH 132

  Fly   230 SIWDMGLDLFRIHFAQNSVVQKRTVDGLLTLIEKERQGSTVDRGLLKSLVRMLCDL--------- 285
            |:||:|.:|...|......|:.:.:..:|.||..:|...:||...||:..|.:..:         
plant   133 SVWDLGSELSPKHLFSAQKVRDKLLSIILQLIRDQRSFMSVDMTQLKNTTRPVMSVHMTQLNNLR 197

  Fly   286 ------QIYTSSFEEK-FLDATNQLYKAESQRKMQELEVPEYLQHV 324
                  .:|.|.|.:| |:|...:.|.||:.:..::.::|.||:.|
plant   198 GLFYGQSLYKSPFFKKPFIDCAVEFYSAEAMQFKEQSDIPLYLKRV 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul4NP_610352.2 Cullin 124..722 CDD:459983 55/220 (25%)
Cullin_Nedd8 753..813 CDD:463146
AT3G46910NP_190275.1 Cullin 30..>244 CDD:459983 55/222 (25%)
Blue background indicates that the domain is not in the aligned region.

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