DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cul4 and Cul1

DIOPT Version :10

Sequence 1:NP_610352.2 Gene:Cul4 / 35780 FlyBaseID:FBgn0033260 Length:821 Species:Drosophila melanogaster
Sequence 2:XP_061518789.1 Gene:Cul1 / 1277942 VectorBaseID:AGAMI1_005719 Length:778 Species:Anopheles gambiae


Alignment Length:791 Identity:250/791 - (31%)
Similarity:390/791 - (49%) Gaps:119/791 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 VKLEEAVIAIQLSKPIK--YSLE---------ELYQAVVNMCS--HK------------------ 156
            :.|||  |...|...||  |..|         |||..|.|.|:  |:                  
Mosquito    15 INLEE--IWTDLEAGIKQVYKRELSLGIARYMELYTHVYNYCTSVHQQPNSRTGSSKISKKGISA 77

  Fly   157 -------MDAQLYAKLKELTEQHVKRNIKLKELTGGSMDKLILLEKINHW-WLSFCQQMIMIRSI 213
                   :..:||.:|||..|.::   ::|.:.....||:.:|......| ...|..:  ::..:
Mosquito    78 PPGGAQLVGQELYKRLKEFLENYL---VRLHQNGIDLMDEEVLSFYTKRWEEYQFSSK--VLNGV 137

  Fly   214 FLYMDRTYVLQ-----NSTVHSIWDMGLDLFRIHFAQNSVVQKRTVDGLLTLIEKERQGSTVDRG 273
            ..|::|.:|.:     ...|:.|:.:.|..:|.:..::  :.|:..:.:|.|||:||.|.|::..
Mosquito   138 CAYLNRHWVKRECEEGRKDVYEIYQLALVTWRGNLFKH--LNKQVTNAVLKLIERERNGETINSR 200

  Fly   274 LLKSLVRMLCD--------------LQIYTSSFEEKFLDATNQLYKAESQRKMQELEVPEYLQHV 324
            |:..::....:              |.:|..|||..||:.|.:.|..||...::|..|.||::.|
Mosquito   201 LVSGVINCYVELGLNEDDPHAKGQNLSVYKESFENIFLEDTERFYTRESAEFLRENPVTEYMKRV 265

  Fly   325 NKRLAEENERLRHYLDSSTKHPLIYNVEKELLAEHLTSILQKGLDSLLEDNRLSDLTLLYGLLSR 389
            ..||.||.:|::.||..||...|....|:.|:..||.. .:....:||..::..||..:|.|::|
Mosquito   266 ELRLNEEQKRVQVYLHESTLDRLAEKCERVLIHIHLDQ-FRTEFQNLLNSDKNQDLGRMYSLVAR 329

  Fly   390 VKNGTSELCGNFN--------GFIKKKGRTIVIDPEKDKSMVQDLLDFKDKMDVIVRTCFEHNEK 446
            :|.|..||.....        ..|:|.|.:.|.||   |..||.:|:...|.:.:|.|.|.::..
Mosquito   330 IKAGLYELKEILETHIHNQGLAAIEKCGDSAVNDP---KIYVQTILEVHKKYNALVLTAFNNDSG 391

  Fly   447 FTNSLREAFEFFIN--------QRANKPAELIAKYVDMKLRSGNKGTTDEELEKTLDKIMVLFRF 503
            |..:|.:|...|||        :.|:|..||:|||.|:.|:..:|...:.|||.||:::||:|::
Mosquito   392 FVAALDKACGKFINTNAVTELSRSASKSPELLAKYCDLLLKKSSKNPEEAELEDTLNQVMVVFKY 456

  Fly   504 IHGKDVFEAFYKKDLAKRLLVGKSASVDSEKSMLSKLKQECGGGFTSKLEGMFKDMELSRDINIA 568
            |..||||:.||.|.|||||....|||.|:|.||:|||||.||..:||||:.||:|:.:|:|:|..
Mosquito   457 IEDKDVFQKFYSKMLAKRLCQHMSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNDQ 521

  Fly   569 FRGH--ALSNNRDV--HNLDLCVSILTMGYWPTYAPTEVTMPPQFINPQQIFNKFYLEKHSGRKL 629
            :|.|  .|.:.|..  :.:|..:.:|:.|.||.......::|.:.......||.||.::||||||
Mosquito   522 YRKHHEKLRDTRSTTQNEIDFSILVLSSGSWPFGQGFTFSLPFELEQSVHRFNNFYAKQHSGRKL 586

  Fly   630 QW------QPTLGNCMLRAQFDAGPKELLVSLFQALVLLLFNDKPVLSYEEILAATLIEDGELRR 688
            .|      ...:.|| .|.::     .|..|.||..|||.||::...|.:::...|.|.:..|.:
Mosquito   587 NWLYNMCRGELITNC-FRMRY-----TLQASTFQMAVLLQFNEETAWSIKQLGENTGINNENLIQ 645

  Fly   689 TLQSLACGRARVITKTP-----KGREILDGDQ-FDFNNEFTNKLFRIKINQIQMKETNEEQKATE 747
            .|.        ::.||.     :|...|..|. .:.|.:|.|:..||.||.....|...||:||.
Mosquito   646 VLP--------ILLKTKLLNCYEGEGKLHPDSTIELNKDFKNRKLRININFPLKSELKVEQEATH 702

  Fly   748 ERVFQDRQYQIDAAIVRIMKMRKTLSHNLLITELFNQLTFPVKP--ADLKKRIESLIDRDYMERD 810
            :.:.:||:..|.|||||||||||.|:|..|:.|:.|||:...||  ..:||.|:.||:::|:||.
Mosquito   703 KNIEEDRKILIQAAIVRIMKMRKMLNHTQLVNEVLNQLSTRFKPKIQVIKKCIDILIEKEYLERQ 767

  Fly   811 KDNQNQYNYVA 821
            :..::.|:|:|
Mosquito   768 EGQKDTYSYLA 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul4NP_610352.2 Cullin 124..722 CDD:459983 205/687 (30%)
Cullin_Nedd8 753..813 CDD:463146 31/61 (51%)
Cul1XP_061518789.1 None

Return to query results.
Submit another query.