DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cul4 and cul2

DIOPT Version :10

Sequence 1:NP_610352.2 Gene:Cul4 / 35780 FlyBaseID:FBgn0033260 Length:821 Species:Drosophila melanogaster
Sequence 2:XP_002935209.2 Gene:cul2 / 100492608 XenbaseID:XB-GENE-960931 Length:766 Species:Xenopus tropicalis


Alignment Length:789 Identity:224/789 - (28%)
Similarity:381/789 - (48%) Gaps:109/789 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VKKIVIKNFKDKPTLPDNYSKDTYVKLEEAVIAIQLSKPIKYSLEELYQAVVNMCSHKMDAQLYA 163
            :|.:|:.::.::.|..|.:| |.|      .:.:...:|                   :..:||.
 Frog    21 IKAVVMLDYVERATWNDRFS-DIY------ALCVAYPEP-------------------LGERLYT 59

  Fly   164 KLKELTEQHVKRNIKLKELTGGSMDKLILLEKINHWWLSFCQQMIMIRSIFLYMDRTYVLQNSTV 228
            :.|...|.||:   :|......|.::::::  ...:|..:.:....:..::.|::..|:.:|...
 Frog    60 ETKIFLENHVQ---QLHTRVLDSAEQVLVM--YYRYWEEYSRGADYMDCLYRYLNTQYIKKNKLT 119

  Fly   229 HS-----------------IWDMGLDLFR---IHFAQNSVVQKRTVDGLLTLIEKERQG----ST 269
            .:                 |.::.|||:|   |...|:::::.     ||..|:::|.|    ..
 Frog   120 EADLQYGYGGVDMNEPLMEIGELALDLWRKLMIEPLQDTLLRM-----LLKEIKRDRCGEDPNQK 179

  Fly   270 VDRGLLKSLV-----RMLCDLQIYTSSFEEKFLDATNQLYKAESQRKMQELEVPEYLQHVNKRLA 329
            |..|::.|.|     :....|:.|...||..||..|.:.||.|:...:||....:|::.:..||.
 Frog   180 VIHGVINSFVHVEQYKKKFPLKFYQEIFELPFLAETGEYYKQEASNLLQESNCSQYMEKILGRLK 244

  Fly   330 EENERLRHYLDSSTKHPLIYNVEKELLAEHLTSILQKGLDSLLEDNRLSDLTLLYGLLSRVKNGT 394
            :|..|.|.||..|:.:.:|:..::.::|:|| ..|.....:::...|.||:..:|.||..|.||.
 Frog   245 DEEIRCRKYLHPSSYNKVIHECQQRMVADHL-QFLHAECHNIIRQERRSDMANMYTLLRAVSNGL 308

  Fly   395 SELCGNFNGFIKKKGRTIVIDPEKDK---SMVQDLLDFKDKMDVIVRTCFEHNEKFTNSLREAFE 456
            ..:.......|..:|...:.:..::.   ..|:.:|:...|...:|.:....::.|.::|.:|..
 Frog   309 PHMIQELQNHIHDEGLRAISNLSQENMPTQFVESVLEVHSKFVQLVNSVLNGDQHFMSALDKALT 373

  Fly   457 FFINQRANKPA----ELIAKYVDMKLRSGNKGTTDEELEKTLDKIMVLFRFIHGKDVFEAFYKKD 517
            ..:|.|..|..    ||:|||.|..|:...||.|:.|:|..|...:.:|::|..||||:.||.:.
 Frog   374 CVVNYREPKSVCKAPELLAKYCDNMLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARM 438

  Fly   518 LAKRLLVGKSASVDSEKSMLSKLKQECGGGFTSKLEGMFKDMELSRDINIAFRGHALSNNRDVHN 582
            |||||:.|.|.|:|||::|::||||.||..|||||..|:.||.:|.|:|..|..  ...|:|. .
 Frog   439 LAKRLIHGLSMSMDSEETMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN--FIKNQDT-V 500

  Fly   583 LDLCVS----ILTMGYWP-TYAPTEVTMPPQFINPQ-QIFNKFYLEKHSGRKLQWQPTLGNCMLR 641
            :||.:|    :|..|.|| |.||:.....||.:... |:|..||.:..|||||.|...|....::
 Frog   501 IDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYNQHFSGRKLTWLHYLCTGEVK 565

  Fly   642 AQFDAGPKELLVSLFQALVLLLFNDKPVLSYEEILAATLIEDGELRRTLQSLACGRARVITKTPK 706
            ..:...|...:|:.:|..|||.||:..:::|:|:..:|.:.:.||.:|::||.  ..::|.. ..
 Frog   566 MNYLCKPYVAMVTTYQMAVLLAFNNSEIVTYKELQDSTQMNEKELTKTIKSLL--DVKMINH-DS 627

  Fly   707 GREILDGDQ-FDFNNEFTNKLFRIKINQIQMKETNE---------------------EQKATEER 749
            .:|.:||:. |..|..|::|..:.||.....|:|.:                     |.:.|...
 Frog   628 DKEDIDGESTFSLNMNFSSKRTKFKITTPMQKDTPQGAQPTCAEEAMLWRGERRFSLEVEQTRSA 692

  Fly   750 VFQDRQYQIDAAIVRIMKMRKTLSHNLLITELFNQLTFPVKP--ADLKKRIESLIDRDYMERDKD 812
            |.:||:..:.||||||||.||.|.||.||.|:.:|......|  :.:||.||.|||:.|:||.:.
 Frog   693 VDEDRKMYLQAAIVRIMKARKILRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQA 757

  Fly   813 NQNQYNYVA 821
            :.::|:|||
 Frog   758 SADEYSYVA 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul4NP_610352.2 Cullin 124..722 CDD:459983 174/640 (27%)
Cullin_Nedd8 753..813 CDD:463146 30/61 (49%)
cul2XP_002935209.2 Cullin 14..644 CDD:459983 181/665 (27%)
Cullin_Nedd8 696..756 CDD:463146 30/59 (51%)

Return to query results.
Submit another query.