DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sand and Kcnk10

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_075584.1 Gene:Kcnk10 / 65272 RGDID:619732 Length:538 Species:Rattus norvegicus


Alignment Length:376 Identity:89/376 - (23%)
Similarity:143/376 - (38%) Gaps:124/376 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 VGIILLVTFYIIGGAFIFQSIEIFEYERLKSEKPHRFIARNFSGECLSRIWELTAENISFF-DHH 97
            |.|.::|..|::.|..:|:::          |:|.....:|          .:..|...|. ||.
  Rat    73 VAIFVVVVVYLVTGGLVFRAL----------EQPFESSQKN----------TIALEKAEFLRDHI 117

  Fly    98 AYRRRVNDVL----LDYQRAIVKKQLKGPD-VEQWSFSGAFLYSLTVITTIGYGNITPHSECGKL 157
            ....:..:.|    ||...|.|.......: ...|....||.::.|||||||||||.|.:|.||:
  Rat   118 CVSPQELETLIQHALDADNAGVSPVGNSSNSSSHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKI 182

  Fly   158 VTILYAIIGMPLFLLYLSNIGDVLAKSFKWIYSKVCLCRICPGVAKRRIIRERRKMRQLARALQM 222
            ..|||||.|:|||...|:.|||.|...|              |.:..|:.:..||          
  Rat   183 FCILYAIFGIPLFGFLLAGIGDQLGTIF--------------GKSIARVEKVFRK---------- 223

  Fly   223 HDMENARGSSSYTSTSSTTSSNSSSSEYTRSSRQSSSLVDIQYTESDSDIEREIRGSTDEITVPV 287
                                            :|.|              :.:||        .:
  Rat   224 --------------------------------KQVS--------------QTKIR--------VI 234

  Fly   288 TVCVFVMVGYILW---GALLFGRWEDWNYLDGSYFCLISLSSIGFGDLVPGDRVITADRD--KVE 347
            :..:|::.|.|::   .|::|...|.|..|:..||.:::|:::||||.|.|.......|:  |..
  Rat   235 STILFILAGCIVFVTIPAVIFKYIEGWTALESIYFVVVTLTTVGFGDFVAGGNAGINYREWYKPL 299

  Fly   348 VSFILCAIYLLLGMAVIAMCFNLM----------QEQVVHNIRAIKRGFKA 388
            |.|     ::|:|:|..|...:::          .::.|..|:|....:||
  Rat   300 VWF-----WILVGLAYFAAVLSMIGDWLRVLSKKTKEEVGEIKAHAAEWKA 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 32/60 (53%)
Ion_trans_2 292..377 CDD:285168 25/99 (25%)
Kcnk10NP_075584.1 Ion_trans_2 148..206 CDD:400301 31/57 (54%)
Ion_trans_2 244..323 CDD:400301 23/83 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 412..444
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9664
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.910

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