DRSC/TRiP Functional Genomics Resources

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Protein Alignment sand and kcnk1

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001011490.1 Gene:kcnk1 / 496985 XenbaseID:XB-GENE-5846322 Length:330 Species:Xenopus tropicalis


Alignment Length:380 Identity:93/380 - (24%)
Similarity:149/380 - (39%) Gaps:125/380 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RHFTAFMFSNVGIILLVTF--YIIGGAFIFQSIEIFEYERLKSE---KPHRFIARNFSGECLSRI 83
            |:.|.:.|    ::|::.:  :::.||.||.::|:.....|:.|   ..||::..|   ||||. 
 Frog    16 RNQTCWCF----VLLMLGYLLFLLIGAAIFSAVELPHEHVLREELLDLKHRYLQEN---ECLSE- 72

  Fly    84 WELTAENISFFDHHAYRRRVNDVL--LDYQRAIVKKQLKGPDVEQWSFSGAFLYSLTVITTIGYG 146
                 |.:..|        ::.||  .:|..:::......|:   |.|:.|..:..||::|.|||
 Frog    73 -----ERLESF--------LSRVLEASNYGVSMLNNVSGNPN---WDFTSALFFVSTVLSTTGYG 121

  Fly   147 NITPHSECGKLVTILYAIIGMPLFLLYLSNIGDVLAKSFKWIYSKVCLCRICPGVAKRRIIRERR 211
            :..|.|..||...|:|:|||:||.||..:.:                :.||...|..|.|     
 Frog   122 HTVPLSNAGKTFCIIYSIIGIPLTLLLFTAL----------------VQRIMVHVTHRPI----- 165

  Fly   212 KMRQLARALQMHDMENARGSSSYTSTSSTTSSNSSSSEYTRSSRQSSSLVDIQYTESDSDIEREI 276
                                 ||.                                       .:
 Frog   166 ---------------------SYF---------------------------------------HL 170

  Fly   277 RGSTDEITVPVT---VCVFV-MVGYILWGALLFGRWE-DWNYLDGSYFCLISLSSIGFGDLVPGD 336
            |...::.||.|.   |..|| ::.:.|..|.:|...| |||:|:..|||.||||:||.||.||.:
 Frog   171 RWGYNKQTVAVVHALVIGFVAILCFFLIPAAIFSALEDDWNFLESFYFCFISLSTIGLGDYVPAE 235

  Fly   337 RVITADRDKVEVSFILCAIYLLLGMAVIAMCFNLMQEQVVHNIRAIKRGFKACFR 391
            ......|...:.. |.|  ||:||:.|:.:......|     ::.:|:..|..:|
 Frog   236 GQNQRYRQLYKFG-ITC--YLILGLIVMLVVLETFCE-----LQGLKKFRKMFYR 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 22/59 (37%)
Ion_trans_2 292..377 CDD:285168 32/86 (37%)
kcnk1NP_001011490.1 Ion_trans_2 <101..157 CDD:311712 23/74 (31%)
Ion_trans_2 192..267 CDD:311712 29/77 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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