DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sand and KCNK3

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_002237.1 Gene:KCNK3 / 3777 HGNCID:6278 Length:394 Species:Homo sapiens


Alignment Length:349 Identity:83/349 - (23%)
Similarity:140/349 - (40%) Gaps:121/349 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NVGIILLV--TF-YIIGGAFIFQSI----EIFEYERLKSEKPHRFIARNFSGECLSRIWELTAE- 89
            ||..:.|:  || |::.||.:|.::    |:.|.:||:                 .|..||.|. 
Human     5 NVRTLALIVCTFTYLLVGAAVFDALESEPELIERQRLE-----------------LRQQELRARY 52

  Fly    90 NISFFDHHAYRRRVNDVLLDYQRAIVKKQLKGPDVEQWSFSGAFLYSLTVITTIGYGNITPHSEC 154
            |:|   ...|.        :.:|.:::.:.....| ||.|:|:|.:::|||||||||:..|.::.
Human    53 NLS---QGGYE--------ELERVVLRLKPHKAGV-QWRFAGSFYFAITVITTIGYGHAAPSTDG 105

  Fly   155 GKLVTILYAIIGMPLFLLYLSNIGDVLAKSFKWIYSKVCLCRICPGVAKRRIIRERRKMRQLARA 219
            ||:..:.||::|:||.|:...::|:                                ::..|.|.
Human   106 GKVFCMFYALLGIPLTLVMFQSLGE--------------------------------RINTLVRY 138

  Fly   220 LQMHDMENARGSSSYTSTSSTTSSNSSSSEYTRSSRQSSSLVDIQYTESDSDIEREIRGSTDEIT 284
            | :|..:...|                   ..|:....:::|.|.:....|              
Human   139 L-LHRAKKGLG-------------------MRRADVSMANMVLIGFFSCIS-------------- 169

  Fly   285 VPVTVCVFVMVGYILWGALLFGRWEDWNYLDGSYFCLISLSSIGFGDLV--PGDRVITADRDKVE 347
               |:|:         ||..|..:|.|.:....|:|.|:|::|||||.|  ..|:.:......|.
Human   170 ---TLCI---------GAAAFSHYEHWTFFQAYYYCFITLTTIGFGDYVALQKDQALQTQPQYVA 222

  Fly   348 VSFILCAIYLLLGMAVIAMCFNLM 371
            .||    :|:|.|:.||....||:
Human   223 FSF----VYILTGLTVIGAFLNLV 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 25/59 (42%)
Ion_trans_2 292..377 CDD:285168 26/82 (32%)
KCNK3NP_002237.1 Ion_trans_2 <77..132 CDD:400301 24/86 (28%)
Ion_trans_2 167..247 CDD:400301 29/106 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 266..286
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 338..357
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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