DRSC/TRiP Functional Genomics Resources

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Protein Alignment sand and KCNK1

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_002236.1 Gene:KCNK1 / 3775 HGNCID:6272 Length:336 Species:Homo sapiens


Alignment Length:385 Identity:92/385 - (23%)
Similarity:149/385 - (38%) Gaps:142/385 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RHFTAFMFSNVGIILL-VTFYIIGGAFIFQSIEIFEYERLKSEK----PHRFIARNFSGECLS-- 81
            ||.:|:.|   |.::| ...|::.||.:|.|:|: .||.|..::    ..||:..:   ||||  
Human    16 RHRSAWCF---GFLVLGYLLYLVFGAVVFSSVEL-PYEDLLRQELRKLKRRFLEEH---ECLSEQ 73

  Fly    82 -------RIWELTAENISFFDHHAYRRRVNDVLLDYQRAIVKKQLKGPDVEQWSFSGAFLYSLTV 139
                   |:.|.:...:|...:.:..                        ..|.|:.|..::.||
Human    74 QLEQFLGRVLEASNYGVSVLSNASGN------------------------WNWDFTSALFFASTV 114

  Fly   140 ITTIGYGNITPHSECGKLVTILYAIIGMPLFLLYLSNIGDVLAKSFKWIYSKVCLCRICPGVAKR 204
            ::|.|||:..|.|:.||...|:|::||:|..||:|:.:                :.||...|.:|
Human   115 LSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAV----------------VQRITVHVTRR 163

  Fly   205 RIIRERRKMRQLARALQMHDMENARGSSSYTSTSSTTSSNSSSSEYTRSSRQSSSLVDIQYTESD 269
            .:             |..|                                              
Human   164 PV-------------LYFH---------------------------------------------- 169

  Fly   270 SDIEREIR-GSTDEITVPVTVCVFVMVGYILWG------ALLFGRWE-DWNYLDGSYFCLISLSS 326
                  || |.:.::   |.:...|::|::...      |.:|...| |||:|:..|||.||||:
Human   170 ------IRWGFSKQV---VAIVHAVLLGFVTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLST 225

  Fly   327 IGFGDLVPGDRVITADRDKVEVSFILCAIYLLLGMAVIAMCFNLMQEQVVHNIRAIKRGF 386
            ||.||.|||:......|:..::. |.|  |||||:  |||...|.....:|.::..::.|
Human   226 IGLGDYVPGEGYNQKFRELYKIG-ITC--YLLLGL--IAMLVVLETFCELHELKKFRKMF 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 21/59 (36%)
Ion_trans_2 292..377 CDD:285168 35/91 (38%)
KCNK1NP_002236.1 Ion_trans_2 <101..157 CDD:400301 22/71 (31%)
pore-forming domain 107..123 7/15 (47%)
Ion_trans_2 192..267 CDD:400301 33/79 (42%)
pore-forming domain 212..238 15/25 (60%)
Important for intracellular retention in recycling endosomes. /evidence=ECO:0000269|PubMed:19959478 293..299
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 57 1.000 Domainoid score I10857
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.810

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