DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sand and twk-48

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001022681.1 Gene:twk-48 / 3565640 WormBaseID:WBGene00010784 Length:372 Species:Caenorhabditis elegans


Alignment Length:408 Identity:137/408 - (33%)
Similarity:215/408 - (52%) Gaps:72/408 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRREKPAFERFKDHCRHFTAFMFSNVGIILLVTFYIIGGAFIFQSIEIFEYERLKSEKPH----R 69
            ||..:....|..:..:...||.||::|:..||..|.:.||.||:::          |.||    :
 Worm     3 RRHRRSKVTRVVNLVKKIIAFFFSHIGLCALVVGYALLGAVIFKAV----------EGPHEAEIQ 57

  Fly    70 FIARNFSGECLSRIWELTAENISFFDHHAYRRRVNDVLLDYQRAIVKKQLKGPDVE------QWS 128
            .:.::...:.:..:|..|. .::..|...:::.|.|.:..::...:....||.|.:      ||:
 Worm    58 ELVKSAREKAVDVVWNATF-RVNRLDSKQWKKTVLDEVKRFKTVCMLSIRKGYDGKEYGKQAQWT 121

  Fly   129 FSGAFLYSLTVITTIGYGNITPHSECGKLVTILYAIIGMPLFLLYLSNIGDVLAKSFKWIYSKVC 193
            |:|||||||||||||||||....:..||.:|:||||||:||.||:|:|||||:||.|:::|::  
 Worm   122 FTGAFLYSLTVITTIGYGNTAAKTYIGKTLTMLYAIIGIPLMLLFLTNIGDVMAKIFRFLYAQ-- 184

  Fly   194 LCRICPGVAKRRII--RERRKMRQLARALQMHDMENARGSSSYTSTSSTTSSNSSSSEYTRSSR- 255
            ..|:     |.|:|  .::||..::.||                        ||..|..||..| 
 Worm   185 SIRL-----KFRLILWHKKRKAAKIRRA------------------------NSLVSRLTRGHRV 220

  Fly   256 QSSSLVDIQYTESDSDIE-----------REIR----GSTDEITVPVTVCVFVMVGYILWGALLF 305
            ::.|.||.....:.:|:|           .|:|    ...:.:|||:::.||.|:||:..|..:|
 Worm   221 KADSSVDSFGLGAGADVEDLLTARVEMEQLEVRETAAAQLESMTVPISLVVFTMLGYLGVGTTIF 285

  Fly   306 GRWEDWNYLDGSYFCLISLSSIGFGDLVPGDRVITADRDKVEVSFILCAIYLLLGMAVIAMCFNL 370
            ..||.|.:|:..|||.|||::|||||..|...|  ::.|:.:...::.:||||.|||::||||||
 Worm   286 KVWEGWTFLESFYFCFISLTTIGFGDKFPSTSV--SNTDEAQEKLVITSIYLLFGMALLAMCFNL 348

  Fly   371 MQEQVVHNIRAIKRGFKA 388
            .||:|.:..|.|...|::
 Worm   349 AQEEVQNKTRWIADKFRS 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 40/65 (62%)
Ion_trans_2 292..377 CDD:285168 40/84 (48%)
twk-48NP_001022681.1 Ion_trans_2 <117..176 CDD:285168 39/58 (67%)
Ion_trans_2 272..355 CDD:285168 40/84 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I5180
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5602
OMA 1 1.010 - - QHG29178
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106457
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2863
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.740

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