DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sand and twk-43

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_872137.2 Gene:twk-43 / 3565024 WormBaseID:WBGene00006693 Length:597 Species:Caenorhabditis elegans


Alignment Length:391 Identity:102/391 - (26%)
Similarity:172/391 - (43%) Gaps:83/391 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FERFKDHCRHFTAFMFSNVGIILLVTFYIIGGAFIFQSIE-----IFEYERLK--SEKPHRFIAR 73
            ||:||.:        ..|.||:|.|..|:..||.:.|.||     :.|..||:  |:.....|..
 Worm    32 FEKFKPY--------LLNAGIVLFVGIYVYAGALLIQYIERIPVKVEESFRLRRNSQDDMPIIPL 88

  Fly    74 NFSGEC----LSRIWELTAENISFFDHHAYRRRVNDVLLDYQR-------------------AIV 115
            :.|.||    |.::.:::..|.|.. |:......|....|.|:                   ..:
 Worm    89 DRSKECVLQALRKMSQISKGNCSQL-HNNVNLLENCYASDLQKLKTIYDSSEGSKAPEQQSAVAL 152

  Fly   116 KKQLKGPDVEQWSFSGAFLYSLTVITTIGYGNITPHSECGKLVTILYAIIGMPLFLLYLSNIGDV 180
            ||.:.....|||:.:.|.|:..||||||||||:.|.|..|::..|:|..||:|..::.::|:|..
 Worm   153 KKFVIVDGFEQWTTTDAILFCFTVITTIGYGNVAPQSFWGRVFVIIYGTIGIPTAMMAIANVGKF 217

  Fly   181 LAKSFK-WIYSKVCLCRICPGVAKRRIIRERRKMRQLARALQMHDMENARGSSSYTSTSSTTSSN 244
            ||...| |....:.|||    ..|:|:.::.:...::....::  ||:                 
 Worm   218 LATLLKSWTRPFLLLCR----KMKKRMQKKDQNGNEIKETQRL--MES----------------- 259

  Fly   245 SSSSEYTRSSRQSSSLVDIQYTESDSDIEREIRGSTDEITVPVTVCVFV-MVGYILWGALLFGRW 308
                    |.:::..:.|...:..|.:.|.|:    :|..|..|:.:|| .:.||:.|:||...:
 Worm   260 --------SKKKAKKIEDDISSHEDEEAEEEV----EESDVTETIVLFVAFLVYIIAGSLLMSYY 312

  Fly   309 ED-WNYLDGSYFCLISLSSIGFGDLVPGDRVITADRDKVEVSFILCAIYLLLGMAVIAMCFNLMQ 372
            |: ..:....||..::|::||.|||||      ...|.:.|:.:.|||.|.|....|.:..:.::
 Worm   313 EEGMTFGLAIYFNFVTLTTIGLGDLVP------QSTDWLFVTLVYCAIGLALTTIAIEIAADTLK 371

  Fly   373 E 373
            :
 Worm   372 K 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 26/59 (44%)
Ion_trans_2 292..377 CDD:285168 26/84 (31%)
twk-43NP_872137.2 Ion_trans_2 <162..218 CDD:285168 25/55 (45%)
Ion_trans_2 298..372 CDD:285168 24/79 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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