DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sand and twk-13

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001122984.1 Gene:twk-13 / 192077 WormBaseID:WBGene00006668 Length:625 Species:Caenorhabditis elegans


Alignment Length:420 Identity:104/420 - (24%)
Similarity:181/420 - (43%) Gaps:102/420 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 HFTAFMFSNVGIILLVTFYIIGGAFIFQSIEIFEYERLKSEKPHRFIARNFSGECLSRI----WE 85
            ||        |::||...|.:.||..|...|....::|::|...|.      ||..:|:    |.
 Worm   116 HF--------GLVLLSIGYTLIGALCFHHYEKPYEQQLRNETSRRI------GELKNRVMDQLWR 166

  Fly    86 LTAENISFFDHHAYRRRVN--------DVLLDYQRAIVKKQ--LKGPDVEQWSFSGAFLYSLTVI 140
            ::....::   ..:|:..|        ||..||.|..:...  :.|....:|||..:..:|.|.|
 Worm   167 MSNNGTAY---STWRQTANDGMDELIRDVFWDYTRNYMTPDDVIYGDGPIKWSFMSSIFFSWTAI 228

  Fly   141 TTIGYGNITPHSECGKLVTILYAIIGMPLFLLYLSNIGDVLA----------------------K 183
            ||||||:|.|.::.|::..|.||::|:||.|:.:::||..||                      |
 Worm   229 TTIGYGHIVPRTDEGRVAIIFYALLGIPLILVTIADIGRFLATYIIKLHHGYMAVMSFVTNSCLK 293

  Fly   184 SFKWIYSKVCLCRICPGVAKRRIIRERRKMRQLARALQMHDMENARGSSSYTSTSSTTSSNSSSS 248
            ..||   ..|..|:     .||.| ....:..|.|..:::...|       ..|.:.|::::...
 Worm   294 CIKW---ACCWIRL-----PRRHI-PMPTLELLQRTQKLYPNNN-------NPTVAATAASAGGG 342

  Fly   249 EYTRSSRQSSSLVDIQYTESDSDI-------EREIRG----------STDEITVPVTVCVFVMVG 296
            ...|..:|..::.|....::.|:|       |.|..|          |..|..|.|...:.:|:|
 Worm   343 TGRRKKQQRDNVSDAGTFDNISEINDGSEGGENENEGEEEEQIQFDPSNHEKRVSVLFILLIMLG 407

  Fly   297 YILWGALLFGRWEDWNYLDGSYFCLISLSSIGFGDLVPGDRVITADRDKVEVSFILCAI-YLLLG 360
            |:..||.:...||:|.:.:..|||.:::::|||||:||.:           |.::...: |::.|
 Worm   408 YVAGGAYIVRWWEEWTFFEAFYFCFVTVTTIGFGDIVPAN-----------VDWLPATLAYIVFG 461

  Fly   361 MAVIAMCFNLMQEQVVHNI----RAIKRGF 386
            :.:..||.:|:..:.:.:|    |::.|.|
 Worm   462 LIITTMCIDLVGSEYIRDIHFYGRSLGRQF 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 26/81 (32%)
Ion_trans_2 292..377 CDD:285168 24/85 (28%)
twk-13NP_001122984.1 Ion_trans_2 <214..269 CDD:285168 24/54 (44%)
Ion_trans <398..464 CDD:278921 22/76 (29%)
Ion_trans_2 403..478 CDD:285168 24/85 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5602
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.970

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