DRSC/TRiP Functional Genomics Resources

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Protein Alignment sand and twk-32

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_506416.2 Gene:twk-32 / 192075 WormBaseID:WBGene00006684 Length:614 Species:Caenorhabditis elegans


Alignment Length:367 Identity:67/367 - (18%)
Similarity:141/367 - (38%) Gaps:111/367 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NVGIILLVTFYIIGGAFIFQSIEIFEYERLKSEKPHRF--IARNFS---------GECLSRIWEL 86
            ::.::::...|.:.|.::   :.:.:|.:..:.:...|  ..:||:         .|..|.:.||
 Worm    36 HITLLVVSILYAVFGGWM---LTLIKYSQQTTHQAIMFDQTRQNFAKRLALIGNKEEFESIVDEL 97

  Fly    87 TAENISFF---DHHAYRRRVNDVLLDYQRAIVKKQLKGPDVEQWSFSGAFLYSLTVITTIGYGNI 148
            ..:...|:   |.|.::          :.|.....|.       :|:....::.|.:|:||||..
 Worm    98 VEKTYDFYTMEDGHRWQ----------EAAFNANPLT-------NFTSNLFFAATTLTSIGYGID 145

  Fly   149 TPHSECGKLVTILYAIIGMPLFLLYLSNIGDVLAKSFKWIYSKVCLCRICPGVAKRRIIRERRKM 213
            .|.|..|::..::|...|:||:|:.::::.....:.....|:::.       ..|.|:.|..::.
 Worm   146 APESLIGRVFCLVYLFFGIPLYLITIADMAKFCTELMNRTYTEII-------KYKYRVKRRYKRW 203

  Fly   214 RQLARALQMHDMENARGSSSYTSTSSTTSSNSSSSEYTRSSRQSSSLVDIQYTESDSDIEREIRG 278
            :                                |....|.|.:...::              |.|
 Worm   204 K--------------------------------SGRIRRESMKVGQVI--------------IAG 222

  Fly   279 STDEIT--------------VPVTVCVFVMVGYILWGALLFGRWEDWNYLDGSYFCLISLSSIGF 329
            ..||:.              ||..:.:.:::.||...:.:....|:||.:||.||.::|:.:|||
 Worm   223 GEDEVAEFLWTHLEHAQFVEVPFLLVIGILLLYIGLSSWIISWVENWNMMDGFYFVMMSVLTIGF 287

  Fly   330 GDLVPGDRVITADRDKVEVSFILCAIYLLLGMAVIAMCFNLM 371
            |||||.:.:..     |.:.||     :|.|:.:...|.:::
 Worm   288 GDLVPRNEIFA-----VPILFI-----ILAGLVLTTTCIDVV 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 15/59 (25%)
Ion_trans_2 292..377 CDD:285168 24/80 (30%)
twk-32NP_506416.2 Ion_trans_2 <125..180 CDD:285168 15/54 (28%)
Ion_trans_2 251..325 CDD:285168 24/79 (30%)
FN3 392..485 CDD:238020
FN3 491..580 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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