DRSC/TRiP Functional Genomics Resources

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Protein Alignment sand and twk-40

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001255206.1 Gene:twk-40 / 189006 WormBaseID:WBGene00006691 Length:436 Species:Caenorhabditis elegans


Alignment Length:408 Identity:98/408 - (24%)
Similarity:181/408 - (44%) Gaps:113/408 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FRRREKPAFER---------FKDHCRHFTAFMFSNVGIILLVTFYIIGGAFIFQSIEIFEYERLK 63
            :.|||:...|.         :|.:.|    .:.::|.:|:|...|:..|||:|..:|......::
 Worm    27 YHRREQDQNENDITSRPMATWKTYAR----IILAHVSLIVLSVVYVGFGAFLFYQLEQPNEVEVR 87

  Fly    64 SEKPHRFIARNFSGECLSRIWELTAENISFFDHHAYRRRVNDVLLDY-------------QRAIV 115
            :....||  .....:.:..:||:....|.   .|.    |.|:.:.|             ...|.
 Worm    88 ARNIERF--NIHKRQMIEHLWEMRESGIG---QHV----VEDLAVKYVDNVTRILFEAFDTHCIG 143

  Fly   116 KKQLK--GPDVE-QWSFSGAFLYSLTVITTIGYGNITPHSECGKLVTILYAIIGMPLFLLYLSNI 177
            .|.|:  |.|.: .|::..|..::.|::|||||||:||.:..|||:.||||:.|:||.|:.:::|
 Worm   144 AKHLRPGGEDEDYNWTYMTALFFTTTLLTTIGYGNLTPVTGRGKLLCILYALFGVPLILITVADI 208

  Fly   178 GDVLAKSFKWIYSKVCLCRICPGVAKRRIIRERRKMRQLARALQMHDMENARGSSSYTSTSSTTS 242
            |..|:::...:|:..                  ||:|:                           
 Worm   209 GKFLSENIVQLYTWY------------------RKLRE--------------------------- 228

  Fly   243 SNSSSSEYTRSSRQSSSLV---DIQYTESDSDIEREIRGSTDEITVPVTVCVFVMVGYILWGALL 304
                     :.|:|..|::   |.:..|.|.:::.    ..:.|::|:.:.|.:::.||.:||::
 Worm   229 ---------KCSKQKYSVISSKDDKNKEGDLNLDH----LENYISIPIFLIVAILLSYITFGAVV 280

  Fly   305 FGRWEDWNYLDGSYFCLISLSSIGFGDLVPGDRVITADRDKVEVSFILCAIYLLLGMAVIAMCFN 369
            ...||.|::..|.||..|:::::||||:||..|..          :||...|:::|:::..||.:
 Worm   281 LSMWEGWDFFSGFYFSFITMTTVGFGDIVPLKREY----------YILDLCYIIIGLSITTMCID 335

  Fly   370 LMQEQVVHNI----RAIK 383
            |:..|.:..:    ||||
 Worm   336 LVGIQYIRKMHYFGRAIK 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 27/60 (45%)
Ion_trans_2 292..377 CDD:285168 26/84 (31%)
twk-40NP_001255206.1 Ion_trans_2 <174..214 CDD:285168 21/39 (54%)
Ion_trans_2 269..343 CDD:285168 26/83 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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