DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sand and twk-47

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001309491.1 Gene:twk-47 / 185227 WormBaseID:WBGene00018002 Length:500 Species:Caenorhabditis elegans


Alignment Length:369 Identity:73/369 - (19%)
Similarity:151/369 - (40%) Gaps:91/369 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NVGIILLVTFYIIGGAFIFQSIEIFEYERLKSEKPHRFIARNFSGECLSRIWELTAEN-ISFF-- 94
            :||:.:.:..|::.||:.|.      |:...::|..:....|...:...:|     || :..|  
 Worm    28 HVGLAVFLFLYLLIGAYAFY------YQEYDADKKIQMTKLNLIRQRYKQI-----ENEVKVFIG 81

  Fly    95 ---DHHAYR----RRVNDVLLDYQRAIVKKQLKGPDVE----QWSFSGAFLYSLTVITTIGYGNI 148
               .:..|:    :.::.:...::....|..:.|...:    :|:...:.||:|:::||.||...
 Worm    82 NDKKYEEYKPKLLKHLSGLSTYHEGREFKSTISGISDDALPPRWTKRSSILYALSILTTTGYAYA 146

  Fly   149 TPHSECGKLVTILYAIIGMPLFLLYLSNIGDVLAKSFKWIYSK----VCLCRICPGV--AKRRII 207
            .|.:..|:...|:|.::|:|:.:|...:.|..|:.....:|||    |...:|...|  .:.|..
 Worm   147 VPVTPIGQCFAIIYGLVGIPMMVLAAVDFGRFLSHIVLELYSKYLDLVHKLKIMKTVILERHRAR 211

  Fly   208 RERRKMRQLARALQMHDMENARGSSSYTSTSSTTSSNSSSSEYTRSSRQSSSLVDIQYTESDSDI 272
            .|:|::....|.:|                    .:.|:.||.|              |:.|..:
 Worm   212 DEKRRLHAFKRLVQ--------------------DTGSTISECT--------------TQKDVQL 242

  Fly   273 EREIRGSTDEI---TVPVTVCVFVMVGYILWGALLF----GRWEDWNYLDGSYFCLISLSSIGFG 330
            |.|....:||:   .:|:.:...:::.:.:.|.:|:    ||   ..::: |:|...:|.:    
 Worm   243 EEEQTTDSDEMPEKRLPLVINASILLIFCMLGGVLYIAAGGR---ATFIE-SFFLTFNLVA---- 299

  Fly   331 DLVPGDRVITADRDKVEVSFILCAIYLLL----GMAVIAMCFNL 370
                   .:|......|::.||..||:.:    |:||::|...|
 Worm   300 -------NLTMSEMPNELNHILTIIYIFVFVTCGVAVLSMSAEL 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 17/63 (27%)
Ion_trans_2 292..377 CDD:285168 18/87 (21%)
twk-47NP_001309491.1 Ion_trans_2 <124..180 CDD:369572 16/55 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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