DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sand and B0310.1

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001370323.1 Gene:B0310.1 / 181922 WormBaseID:WBGene00015137 Length:292 Species:Caenorhabditis elegans


Alignment Length:195 Identity:43/195 - (22%)
Similarity:77/195 - (39%) Gaps:43/195 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PAFERFKDHCRHFTAFMFSNVGIILLVTFYIIGGAFIFQSI------------EIFEYERLKSEK 66
            |.|:.....|..:|         .:||.:..| |..:|.::            .||..:..:|  
 Worm     7 PKFQYAFRRCLFYT---------FVLVAWLFI-GMILFPALCTPAVKQDDNEAGIFRLDAKRS-- 59

  Fly    67 PHRFIARNFSGECLSRIWELTAENISFFDHHAYRRRVNDVLLDYQRAIVKKQLKGPDVEQWSFSG 131
                       :.|:.:|..|..|    ....:....:..|..|::|:::......|....||:.
 Worm    60 -----------DLLNVLWAETITN----GEDDWSELADQKLELYEKALLQHYGIDLDKSDKSFAS 109

  Fly   132 AFLYSLTVITTIGYGNITPHSECGKLVTILYAIIGMPLFLLYLSNIGDVLAKSFK----WIYSKV 192
            ....|..:.||||..::...:..|||:.:|||:||.||||..:..:|.::...::    ||.:.|
 Worm   110 GLQKSFAISTTIGPLDVDDFTTLGKLIAVLYALIGTPLFLTVIGQLGKMVTSVWQGTTLWIVTIV 174

  Fly   193  192
             Worm   175  174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 21/59 (36%)
Ion_trans_2 292..377 CDD:285168
B0310.1NP_001370323.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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