DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sand and twk-42

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_507483.1 Gene:twk-42 / 180163 WormBaseID:WBGene00006692 Length:444 Species:Caenorhabditis elegans


Alignment Length:392 Identity:90/392 - (22%)
Similarity:165/392 - (42%) Gaps:102/392 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FERFKDHCRHFTAFMFSNVGIILLVTFYIIGGAFIFQSIEIFEYERLKSEKPHRFIARNFSGE-- 78
            :||:  |..|..     .:|::::.:|.   ||.:|...|....:.||.|...|.:..:.:.:  
 Worm    10 YERY--HLHHLV-----KIGVLIVYSFL---GAGLFVLCEAENEKSLKHEDNMRVLRTSIAAKQV 64

  Fly    79 CLSRIWELTAEN--ISFFDHHAYRRRVNDVLLDYQRAI---VKKQLKGPDVEQWSFSGAFLYSLT 138
            .:.|:..:.:.|  .|.|.....||    ||.:|..|:   :..::|    .:|...|...|:.|
 Worm    65 FVQRLQNMYSGNGSSSEFSETKLRR----VLSEYDAAMGISIDSKMK----TRWDIWGGLYYAGT 121

  Fly   139 VITTIGYGNITPHSECGKLVTILYAIIGMPLFLLYLSNIGDVL---AKSF------KWIYSKVCL 194
            :.||||||::...:..|::.|:|||:||:|:.:..|::.|::|   ...|      :||.|    
 Worm   122 IYTTIGYGDLAAETIWGRICTMLYAMIGIPIVINILNDWGNMLFYFVDHFWQNIGRQWIQS---- 182

  Fly   195 CRICPGVAKRRIIRERRKMRQLARALQMHDMENARGSSSYTSTSSTTSSNSSSSEYTRSSRQSSS 259
                              :||..|..::..:|  .||...|.... |||...|.:....:|    
 Worm   183 ------------------LRQKLRRRKVQSLE--EGSIDKTPLME-TSSTPPSPQNPNGTR---- 222

  Fly   260 LVDIQYTESDSDIEREIRGSTDEITVPVTVCVFVMVGYILWGALLFGRWEDWNYLDGSYFCLISL 324
                                    .:|:.:.:.|:..:::.....|..:|:|...:..||..||:
 Worm   223 ------------------------PIPLLLVLIVLFFWMIQCVAYFAYFENWTLFESVYFFFISM 263

  Fly   325 SSIGFGDLVPGDRVITADRDKVEVSFILCAIYLLLGMAVIAMCFNLMQEQV--VHN--IRAIKRG 385
            ::|||||..|...|....           .:::|.|::|::||.|::|.|:  :.|  ::.|:..
 Worm   264 TTIGFGDFTPSHTVAVGG-----------IVFILGGLSVVSMCINVIQMQLEFIFNQIVQRIEND 317

  Fly   386 FK 387
            ||
 Worm   318 FK 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 21/62 (34%)
Ion_trans_2 292..377 CDD:285168 23/86 (27%)
twk-42NP_507483.1 Ion_trans_2 <109..165 CDD:285168 20/55 (36%)
Ion_trans_2 236..304 CDD:285168 22/78 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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