DRSC/TRiP Functional Genomics Resources

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Protein Alignment sand and twk-34

DIOPT Version :10

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_506906.3 Gene:twk-34 / 180054 WormBaseID:WBGene00006686 Length:558 Species:Caenorhabditis elegans


Alignment Length:390 Identity:78/390 - (20%)
Similarity:132/390 - (33%) Gaps:149/390 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ERFKDHCRHFTAFMFSNVG-----IILLVTFYIIGGAFIFQSIEIFEYERLKSEKPHRFIARNFS 76
            :|..|...::.||....:|     :.|:|..|.|.|||:|.::|                :||..
 Worm   145 DRHFDRSMYWFAFHRKQIGLRHIMVALMVLSYTIFGAFMFWTVE----------------SRNER 193

  Fly    77 GECLSRIWEL------TAENISFFDHHAYRRRVNDVLLDYQRAI------VKKQLKGPDVE---- 125
            ...|.|:..|      .|.||:...::.........:..|.|..      ::.|.||....    
 Worm   194 AVTLERVTNLENLLNILATNITEIVNNPNTTTTEAEMQVYIREAYVSLMKLEGQYKGSTYYKLED 258

  Fly   126 -----QWSFSGAFLYSLTVITTIGYGNITPHSECGKLVTILYAIIGMPLFLLYLSNIGDVLAKSF 185
                 :|:|..||.:|:.|.||.|||:|.|.|..|:::..||..|.:|:.|:.|.::|.......
 Worm   259 HGKNWKWTFESAFFFSMNVYTTTGYGSIAPESILGQVLVCLYGFIFVPVTLVALRDLGQFFLVHL 323

  Fly   186 KWIYSKVCLCRICPGVAKRRIIRERRKMRQLARALQMHDMENARGSSSYTSTSSTTSSNSSSSEY 250
            ..:|:::                                                          
 Worm   324 TKLYAQL---------------------------------------------------------- 330

  Fly   251 TRSSRQSSSLVDIQYTESDSDIEREIRGST-----DEITVPVTVCVFVMVGYILWGALLFGRWED 310
                        ||..       |||.|.|     :.|.:|:..|:.::..|:.:..:....:::
 Worm   331 ------------IQRW-------REINGDTSIDVNEIIKIPIKACLLLLALYLAFCTIFIHVFDE 376

  Fly   311 WNYLDGS------------YFCLISLSSIGFGDLVPGDRVITADRDKVEVSFILCAIYLLLGMAV 363
               |.|.            ||..||||:||.||::|.:...:.          :.:|....|||:
 Worm   377 ---LSGDESGSGMSVFLCFYFSFISLSTIGLGDIMPNNATFSP----------IISIMFFFGMAL 428

  Fly   364  363
             Worm   429  428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 <127..183 CDD:462301 22/55 (40%)
Ion_trans_2 292..376 CDD:462301 18/84 (21%)
twk-34NP_506906.3 Ion_trans_2 250..319 CDD:462301 23/68 (34%)
Ion_trans_2 366..442 CDD:462301 17/76 (22%)

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