DRSC/TRiP Functional Genomics Resources

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Protein Alignment sand and twk-34

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_506906.3 Gene:twk-34 / 180054 WormBaseID:WBGene00006686 Length:558 Species:Caenorhabditis elegans


Alignment Length:390 Identity:78/390 - (20%)
Similarity:132/390 - (33%) Gaps:149/390 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ERFKDHCRHFTAFMFSNVG-----IILLVTFYIIGGAFIFQSIEIFEYERLKSEKPHRFIARNFS 76
            :|..|...::.||....:|     :.|:|..|.|.|||:|.::|                :||..
 Worm   145 DRHFDRSMYWFAFHRKQIGLRHIMVALMVLSYTIFGAFMFWTVE----------------SRNER 193

  Fly    77 GECLSRIWEL------TAENISFFDHHAYRRRVNDVLLDYQRAI------VKKQLKGPDVE---- 125
            ...|.|:..|      .|.||:...::.........:..|.|..      ::.|.||....    
 Worm   194 AVTLERVTNLENLLNILATNITEIVNNPNTTTTEAEMQVYIREAYVSLMKLEGQYKGSTYYKLED 258

  Fly   126 -----QWSFSGAFLYSLTVITTIGYGNITPHSECGKLVTILYAIIGMPLFLLYLSNIGDVLAKSF 185
                 :|:|..||.:|:.|.||.|||:|.|.|..|:::..||..|.:|:.|:.|.::|.......
 Worm   259 HGKNWKWTFESAFFFSMNVYTTTGYGSIAPESILGQVLVCLYGFIFVPVTLVALRDLGQFFLVHL 323

  Fly   186 KWIYSKVCLCRICPGVAKRRIIRERRKMRQLARALQMHDMENARGSSSYTSTSSTTSSNSSSSEY 250
            ..:|:::                                                          
 Worm   324 TKLYAQL---------------------------------------------------------- 330

  Fly   251 TRSSRQSSSLVDIQYTESDSDIEREIRGST-----DEITVPVTVCVFVMVGYILWGALLFGRWED 310
                        ||..       |||.|.|     :.|.:|:..|:.::..|:.:..:....:::
 Worm   331 ------------IQRW-------REINGDTSIDVNEIIKIPIKACLLLLALYLAFCTIFIHVFDE 376

  Fly   311 WNYLDGS------------YFCLISLSSIGFGDLVPGDRVITADRDKVEVSFILCAIYLLLGMAV 363
               |.|.            ||..||||:||.||::|.:...:.          :.:|....|||:
 Worm   377 ---LSGDESGSGMSVFLCFYFSFISLSTIGLGDIMPNNATFSP----------IISIMFFFGMAL 428

  Fly   364  363
             Worm   429  428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 22/68 (32%)
Ion_trans_2 292..377 CDD:285168 18/84 (21%)
twk-34NP_506906.3 Ion_trans_2 250..319 CDD:285168 23/68 (34%)
Ion_trans_2 366..442 CDD:285168 17/76 (22%)
Ion_trans <387..449 CDD:278921 15/52 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163807
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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