DRSC/TRiP Functional Genomics Resources

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Protein Alignment sand and twk-31

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001022884.1 Gene:twk-31 / 176572 WormBaseID:WBGene00006683 Length:1136 Species:Caenorhabditis elegans


Alignment Length:379 Identity:94/379 - (24%)
Similarity:167/379 - (44%) Gaps:82/379 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FKDHCRH-FTAFMFSNVGIILLVTFYIIGGAFIFQSIEIFEYERLKSEKPHRFIARNFSGECLSR 82
            |...|:| :..:....:...:|:..|...||::|...| .:||| :.:...|...|....:...|
 Worm   129 FLGKCKHYYDKYKLDRISASVLLVLYSFLGAWVFYLFE-HDYER-EVKLKERIDLRMLRNDTFQR 191

  Fly    83 IWELT--AENISFFDHHAYRRRVNDVLLDYQRAIVKKQLKGPDVEQWSFSGAFLYSLTVITTIGY 145
            |..:.  .:.::.|:         :|.:||::.:...:|  |:...|.:.||..|..|:.|||||
 Worm   192 ISSMVFRQQGLANFE---------EVFIDYEKKLHVVRL--PECLDWDYWGALFYVGTLFTTIGY 245

  Fly   146 GNITPHSECGKLVTILYAIIGMPLFLLYLSNIGDVLAKSF--KWIYSKVCLCRICPGVAKRRI-I 207
            |||.|.:..|:..:::|||:|:||.|..||..|..:..|.  ||              .:.|| |
 Worm   246 GNIYPRTALGRAASVVYAIVGIPLVLAILSKCGKWMTDSLSEKW--------------QQHRIQI 296

  Fly   208 RERRKMRQLARALQMHDMENARGSSSYTSTSSTTSSNSSSSEYTRSSRQSSSLVDIQYTESDSDI 272
            .|:.||.:          ...||                     :...:|..:|:.. |.:::|.
 Worm   297 TEKAKMTK----------NRLRG---------------------KKILKSGEIVEAN-TGAEADP 329

  Fly   273 EREIRGSTDEITVPVTVCVFVMVGYILWGALLFGRWED-WNYLDGSYFCLISLSSIGFGDLVPGD 336
            |:  :...:..|:|:.:.:.:.|.|:...:.||..||. |.:....||..|||.:||.||:||  
 Worm   330 EK--KPEVESRTIPIWLALLICVVYVAGCSSLFLLWETRWTFFTSLYFFCISLLTIGLGDIVP-- 390

  Fly   337 RVITADRDKVEVSFILCAIYLLLGMAVIAMCFNLMQ----EQVVHNIRAIKRGF 386
                   ||..: ||:..:.:::|:::::|..:::|    |.:...|..||..:
 Worm   391 -------DKPHM-FIVMFVLVIVGLSIVSMFISVVQIKIEEWLCRMIEQIKEEY 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 25/59 (42%)
Ion_trans_2 292..377 CDD:285168 26/89 (29%)
twk-31NP_001022884.1 Ion_trans_2 <226..283 CDD:285168 25/56 (45%)
Ion_trans_2 347..423 CDD:285168 25/85 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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