DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sand and kcnk18

DIOPT Version :9

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:XP_031761959.1 Gene:kcnk18 / 100486306 XenbaseID:XB-GENE-6257492 Length:429 Species:Xenopus tropicalis


Alignment Length:457 Identity:118/457 - (25%)
Similarity:190/457 - (41%) Gaps:127/457 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRRSSFRRREKPAFERFKDHCRHFTAF--MFSNVGIILLVTFYIIGGAFIFQSI------EIFEY 59
            |...:|...:.|..:|.|...:...||  .|.:|.::..:..|.|.||.:|..|      ||.::
 Frog    15 SEMETFTTTQGPPPQRGKCSWKCLQAFWISFPHVCLVCSLVLYSILGALMFWFIEGSREKEISQF 79

  Fly    60 ERLKSEKPHRFIARNFSGECLSRIWELTAENIS--------------FFDHHAYRRRVNDVLLDY 110
            |                 |.|.::| :..:|.|              .|...|....:.|:.:::
 Frog    80 E-----------------EFLEKLW-MIVQNSSIDNATISDNGSAPEIFKELAREAIITDLQVEW 126

  Fly   111 QRAIVKKQLKGPDVEQWSFSGAFLYSLTVITTIGYGNITPHSECGKLVTILYAIIGMPLFLLYLS 175
                    |:.|: |||||..:..:..||.||:|||:|.|.:..|||..::||.:|:||.||.|:
 Frog   127 --------LQKPE-EQWSFKSSLFFCCTVFTTVGYGHICPVTMYGKLACMVYATLGIPLMLLLLA 182

  Fly   176 NIGDVLAKSFKWIYSKVCLC--RICPGVAKRRIIRERRKMRQLARALQMHDMENARGSSSYTSTS 238
            ::||:||:.....|.:..|.  ::|          .:.|..:|:...:.|.     |.||...|.
 Frog   183 DLGDILARLLSRTYKRAVLACNKLC----------HKPKPIKLSSLHKEHS-----GKSSLLKTM 232

  Fly   239 STTSSNSSSSEYT------------------------------------RSSRQSSSL----VDI 263
            .:..|.......|                                    :||.|..|.    :|:
 Frog   233 DSRVSMKEPLNITEVIKTQASVKRKYLQMRNIDIFELIIVKENQKVLPLKSSLQQKSFSCPDLDL 297

  Fly   264 QYTESDSDIER--EIRGSTDEITVPVTVCVFVMVGYILWGALLFGRWE-DWNYLDGSYFCLISLS 325
             :..|||.::.  :|....|.:.||:.:.|.|||.||:.||.:...|| ||..:|..|||.::|:
 Frog   298 -WPPSDSAMQNFDKIGEELDHLDVPIVLIVLVMVAYIMCGACILPLWEDDWTTIDAFYFCFVTLT 361

  Fly   326 SIGFGDLVPGDRVITADRDKVEVSFILCAIYLLLGMAVIAMCFNLMQEQVVHNIRAIKRGFKACF 390
            :|||||::|          |....|:|.:.|.::||.::.|.|.|.|.::|       ..:|.|.
 Frog   362 TIGFGDIIP----------KHPNYFLLLSAYTVVGMVIVCMAFKLGQNRLV-------SFYKQCI 409

  Fly   391 RC 392
            .|
 Frog   410 LC 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 123..183 CDD:285168 28/59 (47%)
Ion_trans_2 292..377 CDD:285168 32/85 (38%)
kcnk18XP_031761959.1 Ion_trans_2 <131..>175 CDD:400301 20/44 (45%)
Ion_trans_2 327..402 CDD:400301 32/84 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2863
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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