DRSC/TRiP Functional Genomics Resources

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Protein Alignment sand and kcnk6

DIOPT Version :10

Sequence 1:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001120420.1 Gene:kcnk6 / 100145504 XenbaseID:XB-GENE-958681 Length:308 Species:Xenopus tropicalis


Alignment Length:365 Identity:78/365 - (21%)
Similarity:130/365 - (35%) Gaps:150/365 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IILLVTFYIIG---GAFIFQSIEI-------FEYERLKS----EKPHRFIARNFSGECLSRIWEL 86
            :.|||..|:|.   ||.:...||.       .|..:|||    |.|           |:      
 Frog     7 LTLLVCAYVIYLLLGALVISVIESPYEASLRDELRQLKSVFLNESP-----------CV------ 54

  Fly    87 TAENISFFDHHAYRRRVNDVLLDYQRAIVKKQLKGPDVEQWSFSGAFLYSLTVITTIGYGNITPH 151
               |:|..:  |:..::    ::..:..|.......:..:|..:.:..::.|::||:|||..||.
 Frog    55 ---NVSSLE--AFLEKI----INANKYGVSVLHNASNDSKWDIASSMFFASTLVTTVGYGYTTPL 110

  Fly   152 SECGKLVTILYAIIGMPLFLLYLSNIGDVLAKSFKWIYSKVCLCRICPGVAKRRIIRERRKMRQL 216
            ::.||...|.||:||:|..:|.||:.                        .:|.::....|    
 Frog   111 TDSGKAFCIFYALIGVPFTMLVLSSF------------------------VQRLMVMFTHK---- 147

  Fly   217 ARALQMHDMENARGSSSYTSTSSTTSSNSSSSEYTRSSRQSSSLVDIQYTESDSDIEREIRGSTD 281
                                                         .|.|.:.....:|::     
 Frog   148 ---------------------------------------------PIHYLQVQRGFDRKM----- 162

  Fly   282 EITVPVT------VCVFVMVGYILWGALLFGRWE-DWNYLDGSYFCLISLSSIGFGDLVPGDRVI 339
                 ||      :.:.|:|.:::..:.:|...| .|::||..|||.|||.:||.||.|||::  
 Frog   163 -----VTQLHFFFLLILVLVFFLIIPSAIFNTIETTWSFLDAFYFCFISLCTIGLGDYVPGEQ-- 220

  Fly   340 TADRD-------KVEVSFILCAIYLLLG---MAVIAMCFN 369
               .|       ||.|:|     ||.:|   |.:|...|:
 Frog   221 ---NDQWLRKLYKVSVAF-----YLFIGLMAMLLIVQTFH 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sandNP_610349.1 Ion_trans_2 <127..183 CDD:462301 20/55 (36%)
Ion_trans_2 292..376 CDD:462301 31/89 (35%)
kcnk6NP_001120420.1 Ion_trans_2 76..141 CDD:462301 21/88 (24%)
Ion_trans_2 <194..251 CDD:462301 26/66 (39%)

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