DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut1 and RGT2

DIOPT Version :9

Sequence 1:NP_523658.1 Gene:sut1 / 35774 FlyBaseID:FBgn0028563 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_010143.1 Gene:RGT2 / 851417 SGDID:S000002297 Length:763 Species:Saccharomyces cerevisiae


Alignment Length:553 Identity:127/553 - (22%)
Similarity:240/553 - (43%) Gaps:80/553 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ATKSQPAEAQQLYPQPNRVELLSAQTDP-------------SQK-PRWGNLL-LLVALATTFGGA 51
            :|....|::..:...||..::.....:|             ||. |...|:: :||.:....||.
Yeast    47 STNDTEAKSIVMCDDPNAYQISYTNNEPAGDGAIETTSILLSQPLPLRSNVMSVLVGIFVAVGGF 111

  Fly    52 VSTGYCIGVINAPSKLMKVWCNQTLHDTY----GSNLSAGGLDLLWSCVVSVFLVGGAIGSLGGA 112
            : .||..|:||:.:.:..|       .||    .|..:...:.:|    ||...:|...|:|...
Yeast   112 L-FGYDTGLINSITDMPYV-------KTYIAPNHSYFTTSQIAIL----VSFLSLGTFFGALIAP 164

  Fly   113 GAANKFGRKACFLICGA-LFTVGAVLFFFCRAASSVEMLVIGRFVVGLASGLVTATLPMYLSEVA 176
            ..::.:|||...:...| :|::|..|..   |:..:.:|::||.:.|:..|:::|.:|:|.:|.|
Yeast   165 YISDSYGRKPTIMFSTAVIFSIGNSLQV---ASGGLVLLIVGRVISGIGIGIISAVVPLYQAEAA 226

  Fly   177 PMALRG----------TLGVFIAVGVTGGVVVGQVCSLANV-FGTEDLWHYALTAYMFLILVCYL 230
            ...|||          |:|:.::..|:.|.......|...: .|.:.:|...|...|..:     
Yeast   227 QKNLRGAIISSYQWAITIGLLVSSAVSQGTHSKNGPSSYRIPIGLQYVWSSILAVGMIFL----- 286

  Fly   231 PSYLFPESPKFLYIVKGNRAAAKRELQRLRGKDAEE-LIAQEMAEMEA--ESNAKVQTSSFCDVL 292
                 ||||:: |::|.....|.:.|..|||...|: .:.:|:.|::|  :..|....|:..|..
Yeast   287 -----PESPRY-YVLKDELNKAAKSLSFLRGLPIEDPRLLEELVEIKATYDYEASFGPSTLLDCF 345

  Fly   293 RD----PRLTLPLIIVCCFHGGQQLSGINAIFYYSVSIFEKAGLSTVDAQWANLGAGCLNLAVSL 353
            :.    |:..|.:.........||.||||.||||.|:.|...|:.  ::...:..:..:|:|.|:
Yeast   346 KTSENRPKQILRIFTGIAIQAFQQASGINFIFYYGVNFFNNTGVD--NSYLVSFISYAVNVAFSI 408

  Fly   354 LGPWLMAKCNRRTLMMFSCALCSVFLFTIAFVLFYIDQ----VSWFAIACIVCIMGYIFFYQFGL 414
            .|.:|:.:..||.:::....:.::....||.|  .:.:    |:...:...:|:  :|..:....
Yeast   409 PGMYLVDRIGRRPVLLAGGVIMAIANLVIAIV--GVSEGKTVVASKIMIAFICL--FIAAFSATW 469

  Fly   415 GPIPYFIGAELFEVAPRSVAMSMGSLASWTCNFIIGISFPLL------QNAWGAFVFLPFSITCV 473
            |.:.:.:.|||:.:..||...::.:.|:|..||...:..|.:      .::.|..:|..:....|
Yeast   470 GGVVWVVSAELYPLGVRSKCTAICAAANWLVNFTCALITPYIVDVGSHTSSMGPKIFFIWGGLNV 534

  Fly   474 LLFLLTKFYLPETRGRDPSEVAPLVSKGFRSKV 506
            :..::..|.:.||||....|:..|..|...|.:
Yeast   535 VAVIVVYFAVYETRGLTLEEIDELFRKAPNSVI 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut1NP_523658.1 Sugar_tr 55..497 CDD:278511 111/474 (23%)
MFS 96..482 CDD:119392 95/414 (23%)
RGT2NP_010143.1 SP 76..555 CDD:273317 118/510 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342623
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13429
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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