DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment sut1 and PGLCT

DIOPT Version :9

Sequence 1:	NP_523658.1	Gene:	sut1 / 35774	FlyBaseID:	FBgn0028563	Length:	507	Species:	Drosophila melanogaster
Sequence 2:	NP_568328.1	Gene:	PGLCT / 831472	AraportID:	AT5G16150	Length:	546	Species:	Arabidopsis thaliana

Alignment Length:	492	Identity:	139/492 - (28%)
Similarity:	236/492 - (47%)	Gaps:	75/492 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    36 GNLLLLVALATTFGGAVSTGYCIGVINAPSKLMKVWCNQTLHDTYGSNLSAGGLDLLWSCVVSVF 100
            |.:|..|.:|..  ||:..||.:||:|...:.:            ..:|......:|...:||..
plant   103 GTVLPFVGVACL--GAILFGYHLGVVNGALEYL------------AKDLGIAENTVLQGWIVSSL 153

  Fly   101 LVGGAIGSLGGAGAANKFGRKACFLICGALFTVGAVLFFFCRAASSVEMLVIGRFVVGLASGLVT 165
            |.|..:||..|...|:||||...|.:......:||   |.|..|.||:.:::||.:.|:..|:.:
plant   154 LAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGA---FLCATAQSVQTMIVGRLLAGIGIGISS 215

  Fly   166 ATLPMYLSEVAPMALRGTLG----VFIAVGVTGGVVVGQVCSLANVFGTEDLWHYALTAYMFLIL 226
            |.:|:|:||::|..:||.||    :||.:|:...::.|  ..||    ...||      :..:..
plant   216 AIVPLYISEISPTEIRGALGSVNQLFICIGILAALIAG--LPLA----ANPLW------WRTMFG 268

  Fly   227 VCYLPSYLF-------PESPKFLYIVKGNRAAAKRELQRLRGKDAEELIAQEMAEMEAESNAKVQ 284
            |..:||.|.       ||||::| :.:|..:.|::.::.|.||       :.:.|:..:.:|..|
plant   269 VAVIPSVLLAIGMAFSPESPRWL-VQQGKVSEAEKAIKTLYGK-------ERVVELVRDLSASGQ 325

  Fly   285 TSSFCDV----LRDPRLTLPLIIVCCFHGGQQLSGINAIFYYSVSIFEKAGLSTVDAQWANLGAG 345
            .||..:.    |...|....:.:.......|||:||||:.|||.|:|..||:.:..|..|.:||.
plant   326 GSSEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSAGIQSDVAASALVGAS 390

  Fly   346 CLNLAVSLLGPWLMAKCNRRTLMM--FSCALCSVFLFTIAFVLFYIDQVSWFAIAC---IVCIMG 405
              |:..:.:...||.|..|::|::  |.....|:.|.:::|        :|.|:|.   .:.::|
plant   391 --NVFGTAVASSLMDKMGRKSLLLTSFGGMALSMLLLSLSF--------TWKALAAYSGTLAVVG 445

  Fly   406 ---YIFFYQFGLGPIPYFIGAELF--EVAPRSVAMSMGSLASWTCNFIIGISFPLLQNAWG-AFV 464
               |:..:..|.||:|..:..|:|  .:..::||:|:|  ..|..||:||:.|..:...:| :.|
plant   446 TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLG--MHWISNFVIGLYFLSVVTKFGISSV 508

  Fly   465 FLPFSITCVLLFLLTKFYLPETRGRDPSEVAPLVSKG 501
            :|.|:..|||..|.....:.||:||...|:...::.|
plant   509 YLGFAGVCVLAVLYIAGNVVETKGRSLEEIELALTSG 545

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sut1	NP_523658.1	Sugar_tr	55..497	CDD:278511	132/467 (28%)
sut1	NP_523658.1	MFS	96..482	CDD:119392	120/411 (29%)
PGLCT	NP_568328.1	MFS	109..524	CDD:119392	131/463 (28%)
PGLCT	NP_568328.1	Sugar_tr	111..539	CDD:278511	135/476 (28%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D326501at2759
OrthoFinder	1	1.000	-	-		FOG0000120
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.920