DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut1 and INT4

DIOPT Version :9

Sequence 1:NP_523658.1 Gene:sut1 / 35774 FlyBaseID:FBgn0028563 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_001328028.1 Gene:INT4 / 827346 AraportID:AT4G16480 Length:582 Species:Arabidopsis thaliana


Alignment Length:566 Identity:145/566 - (25%)
Similarity:231/566 - (40%) Gaps:128/566 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LLLVALATTFGGAVSTGYCIGVINAPSKLMKVWCNQTLHDTYGSNLSAGGLDLLWSCVVSVFLVG 103
            ::.:||:...||.: .||..|||:.....:|...::....|:           |.|.:||:.:.|
plant    27 IMRLALSAGIGGLL-FGYDTGVISGALLFIKEDFDEVDKKTW-----------LQSTIVSMAVAG 79

  Fly   104 GAIGSLGGAGAANKFGRKACFLICGALFTVGAVLFFFCRAASSVEMLVIGRFVVGLASGLVTATL 168
            ..:|:..|....:||||:...||...||.:||::..|   |.:..::::||..||...|:.:.|.
plant    80 AIVGAAVGGWINDKFGRRMSILIADVLFLIGAIVMAF---APAPWVIIVGRIFVGFGVGMASMTS 141

  Fly   169 PMYLSEVAPMALRGTLGVFIAVGVTGGVVVGQVCSLANVFGTEDLWHYALTAYMFLILVCYLPSY 233
            |:|:||.:|..:||.|.....:.:|||.....:.:||.|. |...|.:.|.......:|.::...
plant   142 PLYISEASPARIRGALVSTNGLLITGGQFFSYLINLAFVH-TPGTWRWMLGVAGVPAIVQFVLML 205

  Fly   234 LFPESPKFLYIVKGNRAAAKRE-LQRLRGKDAEELIAQEMAEMEA--------ESNAKVQTSSFC 289
            ..||||::||  :.:|.|..|. |:|:...|..|      |||||        :::..:...||.
plant   206 SLPESPRWLY--RKDRIAESRAILERIYPADEVE------AEMEALKLSVEAEKADEAIIGDSFS 262

  Fly   290 DVLR----DPRLTLPLIIVCCFHGGQQLSGINAIFYYSVSIFEKAG-LSTVDAQWANLGAGCLNL 349
            ..|:    :|.:...|.........||..|||.:.|||.||.:.|| .|...|...:|....||.
plant   263 AKLKGAFGNPVVRRGLAAGITVQVAQQFVGINTVMYYSPSIVQFAGYASNKTAMALSLITSGLNA 327

  Fly   350 AVSLLGPWLMAKCNRRTLM---MFSCALCSVFLFTI------------AF--------------- 384
            ..|::....:.:..||.||   ||....|.:.|.|:            ||               
plant   328 LGSIVSMMFVDRYGRRKLMIISMFGIIACLIILATVFSQAAIHAPKIDAFESRTFAPNATCSAYA 392

  Fly   385 --------------------------------------VL--------------FYIDQV-SWFA 396
                                                  ||              |:.|.. |.|.
plant   393 PLAAENAPPSRWNCMKCLRSECGFCASGVQPYAPGACVVLSDDMKATCSSRGRTFFKDGCPSKFG 457

  Fly   397 IACIVCIMGYIFFYQFGLGPIPYFIGAELFEVAPRSVAMSMGSLASWTCNFIIGISFPLLQNAWG 461
            ...||.:..||..|..|:|.:|:.:.:|::.:..|.:...:.::::|..|.|:..||..|.:|.|
plant   458 FLAIVFLGLYIVVYAPGMGTVPWIVNSEIYPLRYRGLGGGIAAVSNWVSNLIVSESFLSLTHALG 522

  Fly   462 A----FVFLPFSITCVLLFLLTKFYLPETRGRDPSEVAPLVSKGFR 503
            :    .:|..|| |..|.|:.  ..:|||:|....||..|:..||:
plant   523 SSGTFLLFAGFS-TIGLFFIW--LLVPETKGLQFEEVEKLLEVGFK 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut1NP_523658.1 Sugar_tr 55..497 CDD:278511 138/542 (25%)
MFS 96..482 CDD:119392 123/486 (25%)
INT4NP_001328028.1 MFS_HMIT_like 33..547 CDD:340918 134/540 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326501at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.