DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut1 and AT2G18480

DIOPT Version :9

Sequence 1:NP_523658.1 Gene:sut1 / 35774 FlyBaseID:FBgn0028563 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_179438.1 Gene:AT2G18480 / 816363 AraportID:AT2G18480 Length:508 Species:Arabidopsis thaliana


Alignment Length:490 Identity:121/490 - (24%)
Similarity:216/490 - (44%) Gaps:62/490 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FGGAVST-------GYCIGVINAPSKLMKVWCNQTLHDTYGSNLSAGGLDLLWSCVVSVFLVGGA 105
            ||.|:..       ||..||::.....::  .:..::||. ..:.||.|:|   |.:        
plant    23 FGCAIVASIISIIFGYDTGVMSGAQIFIR--DDLKINDTQ-IEVLAGILNL---CAL-------- 73

  Fly   106 IGSLGGAGAANKFGRKACFLICGALFTVGAVLFFFCRAASSVEMLVIGRFVVGLASGLVTATLPM 170
            :|||.....::..||:....:...:|.||:||..:   ..:..:|::||.:.|:..|......|:
plant    74 VGSLTAGKTSDVIGRRYTIALSAVIFLVGSVLMGY---GPNYPVLMVGRCIAGVGVGFALMIAPV 135

  Fly   171 YLSEVAPMALRGTLGVFIAVGVTGGVVVGQVCSLANVFGTEDL---WHYALTAYMFLILVCYLPS 232
            |.:|::..:.||.|.....:.::.|:::|.|.:..  ||...|   |...|....|..|:.....
plant   136 YSAEISSASHRGFLTSLPELCISLGILLGYVSNYC--FGKLTLKLGWRLMLGIAAFPSLILAFGI 198

  Fly   233 YLFPESPKFLYIVKGNRAAAKR---------ELQRLRGKD---AEELIAQEMAE----MEAESNA 281
            ...||||::| :::|....||:         |....|.:|   |.|:...|:.|    ::.:::.
plant   199 TRMPESPRWL-VMQGRLEEAKKIMVLVSNTEEEAEERFRDILTAAEVDVTEIKEVGGGVKKKNHG 262

  Fly   282 KVQTSSFCDVLRDPRLTLPLIIVCC--FHGGQQLSGINAIFYYSVSIFEKAGLSTVD-AQWANLG 343
            |   |.:.:::..||..:.||::..  .|..:..:||.|:..||..||:|||:.:.| ...|.:|
plant   263 K---SVWRELVIKPRPAVRLILIAAVGIHFFEHATGIEAVVLYSPRIFKKAGVVSKDKLLLATVG 324

  Fly   344 AGCLNLAVSLLGPWLMAKCNRRTLMMFSCALCSVFLFTIAFVLFYID---QVSWFAIACIVCIMG 405
            .|.......::..:|:.|..||.|::.|.......|.::|..|..:.   :::|.....||....
plant   325 VGLTKAFFIIIATFLLDKVGRRKLLLTSTGGMVFALTSLAVSLTMVQRFGRLAWALSLSIVSTYA 389

  Fly   406 YIFFYQFGLGPIPYFIGAELFEVAPRSVAMSMGSLASWTCNFIIGISFPLLQNAWGA----FVFL 466
            ::.|:..|||||.:...:|:|.:..|:...|:|...:...|..:.:||..:..|...    |||.
plant   390 FVAFFSIGLGPITWVYSSEIFPLRLRAQGASIGVAVNRIMNATVSMSFLSMTKAITTGGVFFVFA 454

  Fly   467 PFSITCVLLFLLTKFYLPETRGRDPSEVAPLVSKG 501
            ..::.....|.   |.||||:|....|:..|...|
plant   455 GIAVAAWWFFF---FMLPETKGLPLEEMEKLFGGG 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut1NP_523658.1 Sugar_tr 55..497 CDD:278511 116/470 (25%)
MFS 96..482 CDD:119392 98/414 (24%)
AT2G18480NP_179438.1 MFS_PLT 36..479 CDD:340995 115/468 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.