DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut1 and PMT1

DIOPT Version :9

Sequence 1:NP_523658.1 Gene:sut1 / 35774 FlyBaseID:FBgn0028563 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_179209.1 Gene:PMT1 / 816109 AraportID:AT2G16120 Length:511 Species:Arabidopsis thaliana


Alignment Length:511 Identity:133/511 - (26%)
Similarity:228/511 - (44%) Gaps:73/511 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 AQTDP--SQKPRWGNLLLLVALATTFGGAVSTGYCIGVINAPSKLMKVWCNQTLHDTYGSNLSAG 87
            |:::|  ..:.|:.....::|..|    ::..||.|||::..|..:|.                 
plant    13 AESEPPRGNRSRYAFACAILASMT----SIILGYDIGVMSGASIFIKD----------------- 56

  Fly    88 GLDLLWSCVVSVFLVGGA-IGSLGGAGAANK----FGRKACFLICGALFTVGAVLFFFCRAASSV 147
              ||..|.|....|:|.. |.||.|:|||.:    .||:...::.||.|..||:|..|   |::.
plant    57 --DLKLSDVQLEILMGILNIYSLVGSGAAGRTSDWLGRRYTIVLAGAFFFCGALLMGF---ATNY 116

  Fly   148 EMLVIGRFVVGLASGLVTATLPMYLSEVAPMALRGTLGVFIAVGVTGGVVVGQVCSLANVFGTED 212
            ..:::||||.|:..|......|:|.:||||.:.||.|..|..:.:..|:::|.|   :|.|.::.
plant   117 PFIMVGRFVAGIGVGYAMMIAPVYTAEVAPASSRGFLTSFPEIFINIGILLGYV---SNYFFSKL 178

  Fly   213 LWHYALTAYMFLILVCYLPSYL-------FPESPKFLYIVKGNRAAAKRELQRLRGKDAEEL--- 267
            ..|   ..:.|::.|..:||..       .||||::| :::|....|.:.|.:......|.:   
plant   179 PEH---LGWRFMLGVGAVPSVFLAIGVLAMPESPRWL-VLQGRLGDAFKVLDKTSNTKEEAISRL 239

  Fly   268 --------IAQEMAE--MEAESNAKVQTSSFCDVLRDPRLTLPLIIVCC--FHGGQQLSGINAIF 320
                    |..:|.:  :...:........:.|:|..|..::..|::.|  .|..||.|||:|:.
plant   240 DDIKRAVGIPDDMTDDVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFAQQASGIDAVV 304

  Fly   321 YYSVSIFEKAGL-STVDAQWANLGAGCLNLAVSLLGPWLMAKCNRRTLMMFSCALCSVFLFTIAF 384
            .||.:||.|||| |..|...|.:..|.:.....::|..::.:..||.|::.|.....:.|..:..
plant   305 LYSPTIFSKAGLKSKNDQLLATVAVGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGT 369

  Fly   385 VLFYIDQ-----VSWFAIACIVCIMGYIFFYQFGLGPIPYFIGAELFEVAPRSVAMSMGSLASWT 444
            .|..|::     :.|.....:..:|.::..:..|.||:.:...:|:|.|..|:...|:|.:.:..
plant   370 SLTVINRNPGQTLKWAIGLAVTTVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRL 434

  Fly   445 CNFIIGISFPLLQNA---WGAFVFLPFSITCVLLFLLTKFYLPETRGRDPSEVAPL 497
            .:.|||::|..|...   .|||:..........:|..|  :||||||....|:..|
plant   435 MSGIIGMTFLSLSKGLTIGGAFLLFAGVAAAAWVFFFT--FLPETRGIPLEEMETL 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut1NP_523658.1 Sugar_tr 55..497 CDD:278511 127/477 (27%)
MFS 96..482 CDD:119392 110/421 (26%)
PMT1NP_179209.1 Sugar_tr 29..489 CDD:278511 130/495 (26%)
MFS 31..473 CDD:119392 122/476 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326501at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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