DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut1 and ght6

DIOPT Version :9

Sequence 1:NP_523658.1 Gene:sut1 / 35774 FlyBaseID:FBgn0028563 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_587739.1 Gene:ght6 / 2538845 PomBaseID:SPCC1235.13 Length:535 Species:Schizosaccharomyces pombe


Alignment Length:516 Identity:124/516 - (24%)
Similarity:215/516 - (41%) Gaps:96/516 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LLLLVALATTFGGAVSTGYCIGVINAPSKLMKVWCNQ------TLHDTYGSNLSAGGLDLLWSCV 96
            :|:.|::|....|| .||...|:.|     |:.:.::      .:.|||..:.:..||      :
pombe     9 MLVFVSMAGWMFGA-DTGSIGGITN-----MRDFQSRYADRYDPVTDTYSYSSARQGL------L 61

  Fly    97 VSVFLVGGAIGSLGGAGAANKFGRKACFLICGALFTVGAVLFFFCRAASSVEMLVIGRFVVGLAS 161
            |.:...|..:|.|..:...::||::.|.:....::..| |:.......|.|:|:| .:...||..
pombe    62 VGMVNTGTTVGCLLSSPLGDRFGKRKCIMGWTLVYITG-VIVQLTTIPSWVQMMV-AKIWTGLGI 124

  Fly   162 GLVTATLPMYLSEVAPMALRG----------TLGVFIAVGVTGGVVVGQVCSLANVFGT--EDLW 214
            |.::...|.|.||.:|..:||          |||:|||..:..|         .:.:.|  |..|
pombe   125 GALSVIAPGYQSESSPPHIRGAIVTTYQLFITLGIFIAACINMG---------THKYTTHPEAQW 180

  Fly   215 HYALTAYMFLILVCYLPSYLFPESPKFLYIVKGNRAAAKRELQRLRGKDAEELIAQE-----MAE 274
            ...:...:...::.:......||||::| .|||......:.|.|..|..|:..|.|:     .|:
pombe   181 RVPIGINLLWGILMFFGMLFLPESPRYL-AVKGRNEECMKILTRNAGLPADHPIMQKEYNAIQAD 244

  Fly   275 MEAE------SNAKVQTSSFCDVLRDPRLTLPLIIVCCFHGGQQLSGINAIFYYSVSIFEKAGLS 333
            :|||      |..::    |.:.:|  ..||..:.|..|   |||:|.|..|||...:|...||:
pombe   245 VEAELAGGPCSWPQI----FSNEIR--YRTLLGMGVMAF---QQLTGNNYFFYYGTQVFRGTGLN 300

  Fly   334 T-------VDAQWANLGAGCLNLAVSLLGPWLMAKCNRRTLMMFSCALCSVFLFTIAFV----LF 387
            :       :||    :..||...|:     :::....||..::......|:..|..|.|    |.
pombe   301 SPFLAALILDA----VNFGCTFGAI-----FVLEYFGRRGPLIVGGVWQSICFFIYASVGDRALT 356

  Fly   388 YIDQVSWFAIACIVCIMGYIFFYQFG--LGPIPYFIGAELFEVAPRSVAMSMGSLASWTCNFIIG 450
            ..:..|......::.:...:|.:.|.  ..|..|.|..|.:.:..||...::.:.::|..||:|.
pombe   357 RPNGTSNHRAGAVMIVFSCLFIFSFAQTWAPAAYVIVGESYPIRYRSKCAAVATASNWFWNFMIS 421

  Fly   451 ISFPLLQNAWG---AFVFLPFSI-TCVLLFLLTKFYLPETRGRDPSEVAPLVSKGFRSKVK 507
            ...|.:.|:.|   .:||...:: ..:::||..|    ||:|....|:..|    :.|.:|
pombe   422 FFTPFISNSIGFKYGYVFAACNLCAAIIIFLFAK----ETKGLTLEEINQL----YLSNIK 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut1NP_523658.1 Sugar_tr 55..497 CDD:278511 115/487 (24%)
MFS 96..482 CDD:119392 102/425 (24%)
ght6NP_587739.1 MFS 10..453 CDD:119392 115/484 (24%)
Sugar_tr 11..469 CDD:278511 121/507 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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