DRSC/TRiP Functional Genomics Resources

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Protein Alignment slv and SSN2

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_010731.3 Gene:SSN2 / 852053 SGDID:S000002851 Length:1420 Species:Saccharomyces cerevisiae


Alignment Length:54 Identity:16/54 - (29%)
Similarity:26/54 - (48%) Gaps:8/54 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SGAMICRKYIQKKSTGDSSGVPFICGFLSC----SFWLRYGVLTNEQSIVLVNI 73
            |||:|  |:  ||..||:....|....|:|    |..|...:|...:::..:|:
Yeast  1317 SGALI--KF--KKCDGDTVWDKFAVNLLNCPHSDSTQLLETILEEFRNLAALNV 1366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 16/54 (30%)
MtN3_slv 126..210 CDD:397278
SSN2NP_010731.3 Med13_N 8..279 CDD:463303
Med13_C 1106..1385 CDD:461879 16/54 (30%)
Blue background indicates that the domain is not in the aligned region.

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