DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slv and SWEET6

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_176849.1 Gene:SWEET6 / 842995 AraportID:AT1G66770 Length:261 Species:Arabidopsis thaliana


Alignment Length:200 Identity:67/200 - (33%)
Similarity:101/200 - (50%) Gaps:22/200 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGV-LTNEQSIVLVNI--IGSTLFLVYT 83
            |||........::|||....|.:|::...|:|.....||: :.:..|.:||.|  ||.|:.:|:.
plant    25 FLSPTPTFIHIVKKKSVEKYSPLPYLATLLNCLVRALYGLPMVHPDSTLLVTISGIGITIEIVFL 89

  Fly    84 LIYYVFTVNKRACVKQ-----FGFVLTVLVV------VIVYTNRLEDQRDRMIHVTGIVCCIVTV 137
            .|::||      |.:|     ...||||.||      |:|.|  ||...|:.....|||.|:...
plant    90 TIFFVF------CGRQ
QHRLVISAVLTVQVVFVATLAVLVLT--LEHTTDQRTISVGIVSCVFNA 146

  Fly   138 CFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILSLLQLG 202
            ..:|:||:.:..||:.|:.|.:|..|....|:.:..|.|||.:..|.|:.|||.:||:..|:||.
plant   147 MMYASPLSVMKMVIKTKSLEFMPFLLSVVGFLNAGVWTIYGFVPFDPFLAIPNGIGCVFGLVQLI 211

  Fly   203 LFVLY 207
            |:..|
plant   212 LYGTY 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 23/74 (31%)
MtN3_slv 126..210 CDD:397278 29/81 (36%)
SWEET6NP_176849.1 MtN3_slv 11..99 CDD:481124 24/79 (30%)
MtN3_slv 137..221 CDD:397278 29/79 (37%)

Return to query results.
Submit another query.