DRSC/TRiP Functional Genomics Resources

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Protein Alignment slv and AtVEX1

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_201091.2 Gene:AtVEX1 / 836406 AraportID:AT5G62850 Length:240 Species:Arabidopsis thaliana


Alignment Length:231 Identity:63/231 - (27%)
Similarity:109/231 - (47%) Gaps:29/231 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VISTVFQFLSGAMICR------KYIQKKSTGDSSGVPFICGFLSCSFWLRYGV-LTNEQSIVLVN 72
            ::..|...:|..:.|.      |..:.||..:....|::...|:|..|..||: .....|::::.
plant    10 IVGIVGNVISFGLFCAPIPTMVKIWKMKSVSEFKPDPYVATVLNCMMWTFYGLPFVQPDSLLVIT 74

  Fly    73 IIGSTLF--LVYTLIYYVFT---VNKRACVKQFGFVLTVLVVVI--VYTNRLEDQRDRMIHVTGI 130
            |.|:.||  |||..|::||.   |.::..:.....|:.:.||:.  :|......||..:|   ||
plant    75 INGTGLFMELVYVTIFFVFATSPVRRKITIAMVIEVIFMAVVIFCTMYFLHTTKQRSMLI---GI 136

  Fly   131 VCCIVTVCFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCI 195
            :|.:..|..:||||..:..||:.|:.:.:|..|...:|:..:.|:||..|..|.:|.|||.||.:
plant   137 LCIVFNVIMYAAPLTVMKLVIKTKSVKYMPFFLSLANFMNGVVWVIYACLKFDPYILIPNGLGSL 201

  Fly   196 LSLLQLGLFVLY------------PPRSYSGHGYKL 219
            ..::||.:::.|            ..:.||..|.:|
plant   202 SGIIQLIIYITYYKTTNWNDDDEDKEKRYSNAGIEL 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 24/90 (27%)
MtN3_slv 126..210 CDD:397278 28/95 (29%)
AtVEX1NP_201091.2 MtN3_slv 11..94 CDD:481124 22/82 (27%)
MtN3_slv 132..218 CDD:397278 29/88 (33%)

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