DRSC/TRiP Functional Genomics Resources

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Protein Alignment slv and SWEET13

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_199893.1 Gene:SWEET13 / 835152 AraportID:AT5G50800 Length:294 Species:Arabidopsis thaliana


Alignment Length:211 Identity:52/211 - (24%)
Similarity:100/211 - (47%) Gaps:25/211 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SLLSTTAVISTVFQFLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGVLTNEQSIVL-- 70
            :::|....::.|..|:   .||:    ||||.....:|::....|...|:.|.:..:..:.:|  
plant    17 NIISFVVFLAPVPTFV---RICK----KKSTEGFQSLPYVSALFSAMLWIYYAMQKDGTAFLLIT 74

  Fly    71 VNIIGSTLFLVYTLIYYVFTVNKRACVKQ---------FGFVLTVLVVVIVYTNRLEDQRDRMIH 126
            :|..|..:..:| ::.:|...||:..:..         .||...|||..::......::      
plant    75 INAFGCVIETIY-IVLFVSYANKKTRISTLKVLGLLNFLGFAAIVLVCELLTKGSTREK------ 132

  Fly   127 VTGIVCCIVTVCFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNF 191
            |.|.:|...:|..|||||:.:..|:|.::.|.:|..|.....:.::.||.||:.|.|.::.:||.
plant   133 VLGGICVGFSVSVFAAPLSIMRVVVRTRSVEFMPFSLSLFLTISAVTWLFYGLAIKDFYVALPNV 197

  Fly   192 LGCILSLLQLGLFVLY 207
            ||..|..:|:.|::::
plant   198 LGAFLGAVQMILYIIF 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 19/87 (22%)
MtN3_slv 126..210 CDD:397278 27/82 (33%)
SWEET13NP_199893.1 MtN3_slv 10..98 CDD:397278 20/88 (23%)
MtN3_slv 132..218 CDD:397278 27/88 (31%)

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