DRSC/TRiP Functional Genomics Resources

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Protein Alignment slv and SWEET12

DIOPT Version :10

Sequence 1:NP_477383.1 Gene:slv / 35773 FlyBaseID:FBgn0025469 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_197755.1 Gene:SWEET12 / 832431 AraportID:AT5G23660 Length:285 Species:Arabidopsis thaliana


Alignment Length:213 Identity:60/213 - (28%)
Similarity:101/213 - (47%) Gaps:30/213 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SLLSTTAVISTVFQFLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGVLTNEQSI---V 69
            :|:|....:|.|..|.   .||:    ||:|.....:|::....|...||.|.  |.::.:   |
plant    19 NLISFAVFLSPVPTFY---RICK----KKTTEGFQSIPYVVALFSAMLWLYYA--TQKKDVFLLV 74

  Fly    70 LVNIIGSTLFLVYTLIYYVF--------TVNKRACVKQFGFVLTVLVVVIVY--TNRLEDQRDRM 124
            .:|..|..:..:|..|:..|        ||.....:...||.|.:|:...:.  |.|.:      
plant    75 TINSFGCFIETIYISIFVAFASKKARMLTVKLLLLMNFGGFCLILLLCQFLAKGTTRAK------ 133

  Fly   125 IHVTGIVCCIVTVCFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIP 189
              :.|.:|...:||.|||||:.:..||:.|:.|.:|..|..|..:.::.||:||:.:.|.::..|
plant   134 --IIGGICVGFSVCVFAAPLSIIRTVIKTKSVEYMPFSLSLTLTISAVIWLLYGLALKDIYVAFP 196

  Fly   190 NFLGCILSLLQLGLFVLY 207
            |.:|.:|..||:.|:|:|
plant   197 NVIGFVLGALQMILYVVY 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slvNP_477383.1 MtN3_slv 8..94 CDD:397278 24/96 (25%)
MtN3_slv 126..210 CDD:397278 30/82 (37%)
SWEET12NP_197755.1 MtN3_slv 12..99 CDD:397278 22/88 (25%)
MtN3_slv 133..219 CDD:397278 30/90 (33%)

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